Table 2. The number of peaks in four types of CLAMP or ZLD mediated regions.
Table 2—source data 1. Peaks locations in each CLAMP or ZLD-related category.
Page 1 Type I (n=5): both DA, CLAMP ZLD co-bound Page 2 Type II (n=23): CLAMP DA and ZLD non-DA, CLAMP ZLD co-bound Page 3 Type III (n=88): ZLD DA and CLAMP non-DA, CLAMP ZLD co-bound Page 4 Type IV (n=434): both non-DA, CLAMP ZLD co-bound Page 5 DA with CLAMP 0–2 hr; Page 6 DA without CLAMP 0–2 hr; Page 7 non-DA with CLAMP 0–2 hr; Page 8 non-DA without CLAMP 0–2 hr; Page 9 DA with ZLD NC14 +12 min; Page 10 DA without ZLD NC14 +12 min; Page 11 non-DA with ZLD NC14 +12 min; Page 12 non-DA, without ZLD NC14 +12 min.
elife-69937-table2-data1.xlsx (2.3MB, xlsx)
| ATAC-seq peaks (0–2 hr) | DA w/ CLAMP | DA w/o CLAMP | Non-DA w/ CLAMP | Non-DA w/o CLAMP |
|---|---|---|---|---|
| 16,597 | 74 | 203 | 1239 | 15,081 |
| ATAC-seq peaks (Hannon et al., 2017) (NC14 +12 min) | DA w/ ZLD | DA w/o ZLD | Non-DA w/ ZLD | Non-DA w/o ZLD |
| 19,146 | 976 | 2782 | 2010 | 13,378 |
| CLAMP ZLD co-bound open chromatin regions | Type I (Both DA) |
Type II (CLAMP DA) |
Type III (ZLD DA) |
Type IV (Both non-DA) |
| 525 | 5 | 23 | 123 | 374 |