Table 1.
Significantly associated GWAS SNPs.
| SNP Id | Chr | Bp | Allele risk/non-risk | Location in relation to ABCC4 gene | Risk allele freq. (cases) | Risk allele freq. (controls) | GWAS P value |
|---|---|---|---|---|---|---|---|
| BICF2G630333328 | 22 | 45,875,420 | T/G | intron 19/30 | 0.21 | 0.05 | 1.24e−06 |
| BICF2G630333353 | 22 | 45,882,260 | A/G | intron 19/30 | 0.21 | 0.05 | 1.24e−06 |
| BICF2G630333364 | 22 | 45,886,617 | T/G | intron 19/30 | 0.21 | 0.05 | 1.24e−06 |
| BICF2G630333376 | 22 | 45,892,301 | G/A | intron 19/30 | 0.21 | 0.05 | 1.24e−06 |
| BICF2G630333380 | 22 | 45,893,599 | C/T | intron 18/30 | 0.21 | 0.05 | 1.24e−06 |
The CanFam3.1 genomic coordinates are shown for the five associated GWAS SNPs reaching Bonferroni corrected significance. Allele frequency in cases and controls for the 98 cases and 96 controls is shown.