Table 1.
Statistics of sanchytrid genome assemblies before and after decontamination and comparison with related zoosporic lineages.
| Amoeboradix gromovi | Sanchytrium tribonematis | Allomyces macrogynus | Catenaria anguillulae | Rhizoclosmatium globosum | Spizellomyces punctatus | Anaeromyces robustus | |||
|---|---|---|---|---|---|---|---|---|---|
| Before | After | Before | After | ||||||
| Genome size (Mb) | 48.7 | 10.5 | 37.1 | 11.2 | 52.62 | 41.34 | 57.02 | 24.1 | 71.69 |
| GC% | 51.06 | 36.27 | 42.9 | 34.64 | 61.6 | 56 | 44.9 | 47.6 | 16.3 |
| Number of contigs | 8420 | 1167 | 8015 | 1960 | 8973 | 509 | 437 | 329 | 1035 |
| N50 | 27,236 | 13,376 | 17,350 | 11,874 | 35,497 | 217,825 | 292,246 | 155,888 | 141,798 |
| Predicted proteins | 87,868 | 7220 | 50,780 | 9368 | 19,447 | 12,763 | 16,987 | 9422 | 12,083 |
| Mt genome size (bp) | 27,055 | 24,749 | 57,473 | — | — | 126,474 | — | ||
| Mt genome GC% | 30.69 | 25.86 | 39.5 | — | — | 29.88 | — | ||