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. 2021 Aug 17;22:408. doi: 10.1186/s12859-021-04323-0

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© The Author(s) 2021

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 3 — The correlations between simulated association probabilities and their corresponding experimental measurements. In specific, the correlation between simulated association probabilities and experimental association rates for all 96 protein complexes given a distance cutoff of 16 Å, 18 Å, and 25 Å are plotted in (a), (b), and (c), respectively. To compare simulated association probabilities with experimental association rates on a more quantitative level, we further calculated the Pearson correlation coefficient (PCC) between these two data sets as a function of distance cutoff (d)