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. 2021 Aug 17;19:161. doi: 10.1186/s12915-021-01100-6

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© The Author(s) 2021

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 2 — Temporal dynamics of Arabidopsis DEGs during infection reveal a significant alteration of cell wall biology and hormonal process in response to Fo5176. A Clusters of Arabidopsis coexpressed DEGs during infection using fuzzy c-means clustering. B Biological Processes Enriched in Selected Clusters from (A) using GO enrichment analysis. Enriched GO-terms are depicted as circles, lines connecting the circles show relation between GO-terms. In each group of GO-terms, the most significant category is labeled with the GO-term description. The genes downregulated over time during Fo5176 root colonization (coexpressed in cluster 3 in (A)) are enriched in plant cell wall biological processes (left panel, green). Cluster 7 (right panel) represents general defense responses (dark blue) and responses to hormonal signaling (light blue)