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. Author manuscript; available in PMC: 2021 Aug 18.
Published in final edited form as: ACM BCB. 2021 Aug;2021:49. doi: 10.1145/3459930.3469560

Table 5:

Performance of the best performing model (i.e., RoBERTa-MIMIC-Trial) by entity types on Chia.

Model Strict Criterion Relaxed Criterion
Precision Recall F1 Precision Recall F1
Overall 0.6209 0.6993 0.6578 0.7662 0.8333 0.7984
Condition 0.7324 0.7878 0.7591 0.8721 0.9144 0.8928
Device 0.4667 0.6829 0.5545 0.6167 0.8293 0.7073
Drug 0.6949 0.7910 0.7398 0.8418 0.9100 0.8746
Measurement 0.6127 0.6893 0.6487 0.7937 0.8464 0.8192
Mood 0.2727 0.2449 0.2581 0.3636 0.3265 0.3441
Observation 0.2933 0.2444 0.2667 0.4333 0.3556 0.3906
Person 0.6914 0.8643 0.7683 0.7257 0.8929 0.8007
Pregnancy_considerations 0.0000 0.0000 0.0000 0.3784 0.4444 0.4088
Procedure 0.5012 0.6375 0.5612 0.6560 0.8031 0.7222
Temporal 0.4800 0.6316 0.5455 0.6514 0.8008 0.7184
Value 0.7000 0.7278 0.7136 0.8324 0.8685 0.8500