Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Aug 5;12:656306. doi: 10.3389/fmicb.2021.656306

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2021 Asante, Hetsa, Amoako, Abia, Bester and Essack.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Whole-genome phylogenetic tree annotated with sequence type (ST) assignment, SCCmec types, and antibiotic resistance carriage. Gene names above the annotation according to antibiotic class, as follows: β-lactams: mecA and blaZ; tetracyclines: tet(K) and tet(M); macrolide, lincosamide streptogramin B: msr(A), erm(A), erm(B), erm(C), lsa(A), and mph(C); aminoglycosides: aac(6′)-aph(2″) and aadD; efflux pump: norA; trimethoprim: dfrG; chloramphenicol: cat(pC221) and cat(pC233). The profile was generated using Phandango (https://jameshadfield.github.io/phandango/#/). Heat map at the middle indicates antibiotic resistance gene presence (purple) and absence (yellow). NT, non-typeable.