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. 2021 Mar 1;71(3):004438. doi: 10.1099/ijsem.0.004438

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© 2021 The Authors

This is an open-access article distributed under the terms of the Creative Commons Attribution License. This article was made open access via a Publish and Read agreement between the Microbiology Society and the corresponding author’s institution.

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Fig. 2. — Phylogenomic tree of the ‘Fortuitum–Vaccae’ clade of Mycobacteria (a) and the similarity of 16S rRNA genes (top portion of triangular matrix) and average nucleotide identity (ANI) of genomes (bottom portion of triangular matrix) Units of scale bar are amino acid substituions per position.(b). Numbers within the collapsed clades of the phylogenomic tree represent the number of genomes that are within that clade. Phylogenomic reconstruction was based on 15 single-copy genes and the tree was bootstrapped 1000 times with IQ-Tree (see text for full methods). Red highlighted cells represent similarity values >99 %, orange cells 98–99 % similarity, yellow 97–98 %, and blue cells 95–97 % similarity.