Table 1. Genome statistical information of nine investigated Salmonella strains as obtained by Prokka pipeline and ANI calculator.
#Organism name | Geographic location | Accession number | Assembly status | Total length | Size | GC | CDS | tRNA | tmRNA | rRNA | rr | SNP detected |
---|---|---|---|---|---|---|---|---|---|---|---|---|
(MB) | Content % | |||||||||||
S. enterica Enteritidis | United Kingdom | NC_011294.1 | Complete | 4,685,848 | 4.68 | 52.17 | 4352 | 85 | 1 | 22 | 2 | - |
str. P125109 | ||||||||||||
S. enterica Gallinarum | Brazil | NC_011274.1 | Complete | 4,658,697 | 4.65 | 52.20 | 4452 | 77 | 1 | 22 | 2 | 7832 |
str. 287/91 | ||||||||||||
S. enterica Gallinarum | Not available | NZ_CP019035.1 | Complete | 4,609,911 | 4.60 | 52.20 | 4399 | 78 | 1 | 22 | 2 | 7505 |
str. 9184 | ||||||||||||
S.enterica Gallinarum | India | JSWQ00000000.1 | Contig | 4,598,206 | 4.59 | 52.22 | 4455 | 68 | 1 | 4 | 2 | 7946 |
str. Sal40 | ||||||||||||
S.enterica Pullorum | USA | NZ_CP012347.1 | Complete | 4,694,842 | 4.69 | 52.19 | 4474 | 81 | 1 | 23 | 2 | 7424 |
str. ATCC 9120 | ||||||||||||
S.enterica Pullorum | China | NC_021984.1 | Complete | 4,682,599 | 4.68 | 52.14 | 4635 | 80 | 1 | 22 | - | 12726 |
str. S06004 | ||||||||||||
S.enterica Pullorum | China | NZ_CP022963.1 | Complete | 4,728,875 | 4.72 | 52.17 | 4548 | 75 | 1 | 22 | 2 | 7543 |
str. QJ-2D-Sal | ||||||||||||
S.enterica Gallinarum/Pullorum | China | NC_022221.1 | Complete | 4,623,089 | 4.62 | 52.23 | 4397 | 78 | 1 | 22 | 2 | 7786 |
str. CDC1983-67 | ||||||||||||
S.enterica Gallinarum/pullorum | Not available | NC_016831.1 | Complete | 4,637,962 | 4.63 | 52.21 | 4451 | 75 | 1 | 22 | 2 | 8038 |
str. RKS5078 |