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. 2021 Aug 9;17(8):e1009786. doi: 10.1371/journal.ppat.1009786

Fig 3. ACR for the transmission mode of CRF19.

Fig 3

ACR is done with PastML [18] (MPPA+F81), the visualisation is performed with iTOL [19]. Nodes and branches are coloured by transmission mode (green for HET, beige for MSM), gray thinner branches correspond to a state change, gray nodes have unresolved states (MSM or HET). The colourstrip around the tree shows the gender of the sampled individuals (red for female, blue for male), and we see several transmissions from the MSM community to female HET individuals.