| Antibodies |
| Rabbit anti-C1QL2 |
Thermo Fisher |
PA5-101536 |
| Chicken anti-GFP |
Thermo Fisher |
A-10262 |
| Rabbit anti-RFP |
Rockland |
600-401-379 |
| Rabbit anti-cFos |
Cell Signaling |
2250 |
| Anti-rabbit Alexa-488 |
Thermo Fisher |
A-11008 |
| Anti-chicken Alexa-488 |
Thermo Fisher |
A-11039 |
| Anti-rabbit Alexa-555 |
Thermo Fisher |
A-21428 |
|
|
|
| Bacterial and virus strains |
| AAVretro-hSyn-Cre |
Addgene |
105553-AAVrg |
| AAV9-EF1α-DIO-ChR2-eYFP |
Addgene |
20298-AAV9 |
| AAV9-CaMKIIα-ChR2-eYFP |
Addgene |
26969-AAV9 |
| AAV9-CaMKIIα-ChR2-mCherry |
Addgene |
26975-AAV9 |
| AAV8-hSyn-DIO-hM4Di-mCherry |
Addgene |
44362-AAV8 |
| AAV8-hSyn-DIO-mCherry |
Addgene |
50459-AAV8 |
| AAV1-hSyn-Cre |
Addgene |
105553-AAV1 |
| AAV9-hSyn-DIO-hM3Dq-mCherry |
Addgene |
44361-AAV9 |
| AAV8-hSyn-mCherry |
Addgene |
114472-AAV8 |
| AAV8-hSyn-DIO-hM4Di-mCitrine |
Addgene |
50455-AAV8 |
| AAV8-CaMKIIα-hM4Di-mCherry |
Addgene |
50477-AAV8 |
| AAV9-EF1α-DIO-eYFP |
UNC Vector Core |
N/A |
| AAV9-EF1α-DIO-eArch3.0-eYFP |
UNC Vector Core |
N/A |
| RV-GFP |
Wickersham I., MIT |
N/A |
| AAV5-synP-FLEX-sTpEpB |
Wickersham I., MIT |
N/A |
| RVΔG-mCherry |
Wickersham I., MIT |
N/A |
| RVdGL-Cre |
Wickersham I., MIT |
N/A |
| AAV9-sgRNAPTCHD1-mCh |
This paper |
N/A |
| AAV9-sgRNACACNA1G-mCh |
Li et al., 2020
|
N/A |
| AAV9-sgRNAYWHAG-mCh |
This paper |
N/A |
| AAV9-sgRNAGRIA3-mCh |
This paper |
N/A |
| AAV9-sgRNAHERC1-mCh |
This paper |
N/A |
| AAV9-sgRNAATP1A3-mCh |
This paper |
N/A |
| AAV9-sgRNAMTOR-mCh |
This paper |
N/A |
| AAV9-sgRNACNTNAP2-mCh |
This paper |
N/A |
| AAV9-CMV-SpCas9 |
Vector Biolabs |
N/A |
|
|
|
| Biological samples |
|
|
| Normal human donor anterior thalamus sample |
Cureline, Inc. |
N/A |
|
|
|
| Chemicals, peptides, and recombinant proteins |
| DAPI |
Sigma |
D9542 |
| CTB 488 |
Thermo Fisher |
C34775 |
| CTB 555 |
Thermo Fisher |
C34776 |
| CTB 647 |
Thermo Fisher |
C34778 |
|
|
|
| Critical commercial assays |
|
|
|
|
|
|
|
|
|
| Deposited data |
|
|
|
|
|
|
|
|
|
| Experimental models: Cell lines |
|
|
|
|
|
|
|
|
|
| Experimental models: Organisms/strains |
| C57BL/6J mice |
Jackson Labs |
N/A |
| C1QL2-IRES-Cre mice |
This paper |
N/A |
| CaMKII-Cre mice |
Jackson Labs |
5359 |
| GAD2-IRES-Cre mice |
Jackson Labs |
28867 |
| PV-Cre mice |
Jackson Labs |
17320 |
| SST-IRES-Cre mice |
Jackson Labs |
28864 |
| VIP-IRES-Cre mice |
Jackson Labs |
31628 |
| FosTRAP mice |
Guenthner et al., 2013
|
N/A |
| Common marmosets |
Feng G., MIT |
N/A |
|
|
|
| Oligonucleotides |
| Cntnap2 mouse probe |
ACD |
449381 |
| Atp1a3 mouse probe |
ACD |
432511 |
| Gria3 mouse probe |
ACD |
426251 |
| Mtor mouse probe |
ACD |
451651 |
| Ywhag mouse probe |
ACD |
812981 |
| Herc1 mouse probe |
ACD |
871341 |
| Cacna1g mouse probe |
ACD |
459761 |
| C1ql2 mouse probe |
ACD |
480871 |
| PV mouse probe |
ACD |
421931 |
| Col25a1 mouse probe |
ACD |
538511 |
| Rabies virus probe |
ACD |
456781 |
| Ptchd1 mouse probe |
ACD |
489651 |
| Slc17a6 mouse probe |
ACD |
319171 |
| Kcnj12 mouse probe |
ACD |
525171 |
| Kcnq2 mouse probe |
ACD |
444251 |
| Kcna1 mouse probe |
ACD |
481921 |
| Cacna1a mouse probe |
ACD |
493141 |
| Cacna1b mouse probe |
ACD |
468811 |
| C1ql2 marmoset probe |
ACD |
525821 |
| Col25a1 marmoset probe |
ACD |
557651 |
| C1ql2 human probe |
ACD |
478011 |
|
|
|
| Recombinant DNA |
| AAV-EF1α-DO-NpHR3.0-eYFP |
Addgene |
37087 |
| AAV-EF1α-DO-eGFP |
Addgene |
37085 |
| AAV-EF1α-DO-ChETA-tdTomato |
Addgene |
37756 |
| AAV-EF1α-DIO-C1V1-eYFP |
Addgene |
35497 |
| AAV-CaMKIIα-mCherry |
Addgene |
114469 |
| AAV-cFos-CreERT2
|
Ye et al., 2016
|
N/A |
| AAV-DIO-SpCas9 |
Xu et al., 2018
|
N/A |
|
|
|
| Software and algorithms |
| ImageJ |
NIH |
imagej.nih.gov/ij
|
| Prism 6 |
GraphPad Software |
graphpad.com/scientific-software/prism
|
| EthoVision |
Noldus |
noldus.com/animal-behavior-research/products/ethovision-xt
|
| MATLAB |
MathWorks |
mathworks.com/products/matlab.html
|
|
|
|
| Other |
|
|
|
|
|
|
|
|
|
