Table 2.
Proviral genes which lost their function due to structural variants.
| NCBI ID | Gene name | LOF related variant type |
|---|---|---|
| 103235187 | endogenous retrovirus group V member 2(ERVV-2) | Deletion: Frameshift variant |
| 103231639 | angiotensin I convening enzyme 2(ACE2) | Insertion: Splice acceptor & intron variant (multiple stop codons) Deletion: Frameshift variant |
| 103227905 | endogenous Bomavirus-like nucleoprotein 2(EBLN2) | Insertion: Frameshift variant (multiple stop codons) |
| 103229363 | feline leukemia virus subgroup C cellular receptor family member 2(FLVCR2) | Insertion: Frameshift variant |
| 103225011 | human immunodeficiency virus type I enhancer-binding protein 3(HIVEP3) | Deletion: Frameshift variant |
| 103230431 | influenza virus NSIA binding protein(IVNSIABP) | Insertion: Frameshift variant |
| 103240251 | murine retrovirus integration site 1 homolog(MRVI1) | Deletion: Feature ablation (multiple stop codons) |
| 103235692 | endogenous retrovirus group MER34 member HERVMER34–1) | Deletion: Frameshift variant (multiple stop codons) |
| 103237620 | solute carrier family 52 member 2(SLC52A2) | Insertion: Frameshift variant |
| 103215978 | solute carrier family 52 member 3(SLC52A3) | Deletion: Frameshift variant |
| 103227211 | zinc finger and SCAN domain containing 10(ZSCANIO) | Insertion: Frameshift variant |
| 103222367 | zinc finger and SCAN domain containing 12(ZSCANI2) | Deletion: Frameshift variant |
| 103221929 | zinc finger and SCAN domain containing 16(ZSCANI6) | Deletion: Frameshift variant |
| 103246758 | zinc finger and SCAN domain containing 21(ZSCAN21) | Insertion: Frameshift variant |
| 103221914 | zinc finger and SCAN domain containing 23(ZSCAN23) | Insertion: Frameshift variant |
| 103245744 | zinc finger and SCAN domain containing 29(ZSCAN29) | Insertion: Frameshift variant |
| 103227463 | zinc finger and SCAN domain containing 32(ZSCAN32) | Insertion: Frameshift variant |
| 103235415 | zinc finger and SCAN domain containing 4(ZSCAN4) | Deletion: Frameshift variant |
| 103227450 | zinc finger protein 174(ZNF174) | Insertion: Frameshift variant |
| 103227495 | zinc finger protein 197(ZNF197) | Insertion: Frameshift variant (multiple stop codons) |
| 103248713 | zinc finger protein 202(ZNF202) | Insertion: Frameshift variant |
| 103241144 | zinc fmger protein 215(ZNF215) | Deletion: Frameshift variant (no start codon) |
| 103242227 | zinc finger protein 232(ZNF232) | Deletion: Frameshift variant |
| 103222539 | zinc finger protein 24(ZNF24) | Insertion: Frameshift variant |
| 103227313 | zinc fmger protein 263(ZNF263) | Deletion: Frameshift variant |
| 103222546 | zinc finger protein 397(ZNF397) | Deletion: Frameshift variant |
| 103235347 | zinc finger protein 444(ZNF444) | Deletion: Frameshift variant |
| 103227490 | zinc finger protein 445(ZNF445) | Deletion: Frameshift variant |
| 103235451 | zinc fmger protein 446(ZNF446) | SNP: Splice acceptor & intron variant |
| 103221931 | zinc finger with KRAB and SCAN domains 8(ZKSCANS) | Deletion: Frameshift variant |
| 103233722 | ATCAY, caytaxin(ATCAY) | Insertion: Frameshift variant |
| 103247216 | BCL2 interacting protein-like(BNIPL) | Insertion: Frameshift variant |
| 103233646 | adapter related protein complex 3 delta 1 subunit(AP3D1) |
LOF loss of function.