Table 2.
Characteristics of 14 novel piRNAs in the H1-HeLa cells.
| piRNA id | Chromosome | Repeat family | Strand | Start | End | Sequence |
|---|---|---|---|---|---|---|
| novel_pir97924 | chr8 | LINE/L1 | − | 136,785,683 | 136,786,238 | GGGGGGCCCAAGTCCTTCTG |
| novel_pir78110 | chr3 | DNA/hAT-Charlie | − | 61,684,855 | 61,685,144 | CCACCCTGAACGCGCCCGA |
| novel_pir78107 | chr3 | DNA/hAT-Charlie | − | 61,684,855 | 61,685,144 | ACCACCCTGAACGCGCCCGA |
| novel_pir78097 | chr3 | DNA/hAT-Charlie | − | 61,684,855 | 61,685,144 | TACCACCCTGAACGCGCCCGA |
| novel_pir78094 | chr3 | DNA/hAT-Charlie | − | 61,684,855 | 61,685,144 | TACCACCCTGAACGCGCCCG |
| novel_pir76584 | chr3 | DNA/hAT-Charlie | − | 31,021,593 | 31,021,781 | GTTGGGACAAAAAAAAAA |
| novel_pir73855 | chr3 | LTR/ERVK | − | 15,779,666 | 15,780,942 | TTCTGGGCTGTAGTGCGCTA |
| novel_pir70108 | chr2 | LTR/ERVL-MaLR | − | 12,439,669 | 12,440,139 | GGTTGGGAAAAAAAAAAAA |
| novel_pir70106 | chr2 | LTR/ERVL-MaLR | − | 12,439,669 | 12,440,139 | GGTTGGGAAAAAAAAAAAAA |
| novel_pir46604 | chr18 | LTR/ERV1 | − | 68,878,785 | 68,880,277 | GGGCGGCGGGGCGGGGCGG |
| novel_pir33182 | chr14 | LTR/ERV1 | + | 102,706,661 | 102,707,085 | TCCCGGGTTTCGGCACCAAA |
| novel_pir15900 | chr11 | DNA/hAT-Tip100 | + | 62,126,034 | 62,126,618 | TGGTTAGCACTCTGGACT |
| novel_pir105705 | chrX | LINE/L1 | + | 121,106,366 | 121,108,397 | ACGTAGCAGAGCAGCTCCCTCGC |
| novel_pir105700 | chrX | LINE/L1 | + | 121,106,366 | 121,108,397 | TACGTAGCAGAGCAGCTCCCTCGC |