Table 1.
Significantly enriched gene sets in cocultured epithelial cells
| Gene Ontology (GO) Process Name | Gene Set Size | Enrichment Score | Normalized Enrichment Score | Nominal p-value | FDR q-value | Rank at Maximum |
|---|---|---|---|---|---|---|
| Extracellular Matrix Structural Constituent | 52 | 0.764 | 2.868 | 0.000 | 0.000 | 692 |
| Basement Membrane | 38 | 0.659 | 2.338 | 0.000 | 0.013 | 692 |
| Collagen Containing Extracellular Matrix | 137 | 0.513 | 2.278 | 0.000 | 0.027 | 818 |
| Transmembrane Receptor Protein Tyrosine Kinase Activity | 24 | 0.693 | 2.258 | 0.000 | 0.025 | 1349 |
| Collagen Trimer | 15 | 0.807 | 2.237 | 0.003 | 0.027 | 542 |
| Extracellular Matrix | 160 | 0.472 | 2.226 | 0.000 | 0.027 | 1438 |
| Peptide Cross Linking | 15 | 0.747 | 2.171 | 0.000 | 0.046 | 983 |
| GDP Binding | 50 | −0.712 | −2.260 | 0.003 | 1.000 | 1327 |
| Ubiquitin Like Protein Conjugating Enzyme Activity | 33 | −0.694 | −2.041 | 0.004 | 1.000 | 849 |
*
GO Processes with a |normalized enrichment score| > 2 and an FDR-adjusted significance < 0.05 are included in this table.