Table 2.
PmrA-regulated genes specifying products not known to be involved in LPS modifications in Salmonella enterica serovar Typhimurium.
| Gene | Function | PmrA-binding site | Reference |
|---|---|---|---|
| aroQ | Periplasmic chorismate mutase | CTTAAtgttatCTTAAT | (Marchal et al., 2004) |
| deoA | Thymidine phosphorylase | Not detected | (Tamayo et al., 2005b) |
| dgoA | 2-oxo-3-deoxygalactonate 6-phosphate aldolase, catalyzes the final reaction in the degradation of D-galactonate | Not detected | (Tamayo et al., 2002) |
| mig-13/ybjG | Undecaprenyl pyrophosphate phosphatase | CTTTAAggttaaTTTAA | (Marchal et al., 2004) |
| pmrAB | Two-component regulatory system responding to Fe3+ | Follows pmrC in the pmrCAB operon | (Gunn et al., 1998; Roland et al., 1994; Wosten and Groisman, 1999; Wosten et al., 2000) |
| pmrD | Connects the PhoP/PhoQ and PmrA/PmrB systems | ATTAATgttagGTTAAT | (Kox et al., 2000) |
| pmrR | Negative regulator of the PmrA/PmrB system | CTTAAGgttcgCTTAAT | (Kato et al., 2012) |
| sseJ | SPI-2 secreted effector | CTTAAgaaataTTTAAT | (Marchal et al., 2004) |
| STM1253 | Putative inner membrane protein, cytochrome b homolog | TTTAAggttctGTTAAG | (Tamayo et al., 2005b) |
| udp | Uridine phosphorylase | Not detected | (Tamayo et al., 2005b) |
| yibD | Putative glycosyltransferase | CTTAAtagtttCTTAAT | (Marchal et al., 2004; Tamayo et al., 2002) |
| yrbL | Unknown function | ACATTAAgaaaacCTTAAA | (Zwir et al., 2005) |