Table 2. List of genes of Bactris gasipaes plastome organized according to their location.
Plastome region | Name of genes |
---|---|
Large Single Copy (LSC) | psbA, trnK-UUU*, matK, rps16*, trnQ-UUG, psbK, psbI, trnS-GCU, trnG-UCC*, trnR-UCU, atpA, atpF*, atpH, atpI, rps2, rpoC2, rpoC1*, rpoB, trnC-GCA, petN, psbM, trnD-GUC, trnY-GUA, trnE-UUC, trnT-GGU, psbD, psbC, trnS-UGA, psbZ, trnG-GCC, trnfM-CAU, rps14, psaB, psaA, ycf3*, trnS-GGA, rps4, trnT-UGU, trnL-UAA*, trnF-GAA, ndhJ, ndhK, ndhC, trnV-UAC*, trnM-CAU, atpE, atpB, rbcL, accD, psaI, ycf4, cemA, petA, psbJ, psbL, psbF, psbE, petL, petG, trnW-CCA, trnP-UGG, psaJ, rpl33, rps18, rpl20, rps12* (exon 1), clpP*, psbB, psbT, psbN, psbH, petB*, petD*, rpoA, rps11, rpl36, infA, rps8, rpl14, rpl16*, rps3, rpl22 |
Inverted Repeat (IR) | rps19, trnH-GUG, rpl2*, rpl23, trnI-CAU, ycf2, trnL-CAA, ndhB*, rps7, rps12* (exons 2 and 3), trnV-GAC, rrn16, trnI-GAU*, trnA-UGC*, rrn23, rrn4.5, rrn5, trnR-ACG, trnN-GUU |
IR / SSC junction | ndhF, ycf1 |
Small Single Copy (SSC) | rpl32, trnL-UAG, ccsA, ndhD, psaC, ndhE, ndhG, ndhI, ndhA*, ndhH, rps15 |
* Intron-containing genes.