. Author manuscript; available in PMC: 2022 Sep 15.

Published in final edited form as: Anal Biochem. 2021 May 9;629:114239. doi: 10.1016/j.ab.2021.114239

Table 1:

Oligonucleotides used in this study

Oligo Name	DNA / RNA	Sequence 5’ -> 3’	Extinction Coefficient, 260 nm (M⁻¹ cm⁻¹)
Cy3 Int. Std.	DNA	[Cy3]-CCGTGAGTTGGTTGGACGGCTGCGAGGC	266,800
FAM-27	DNA	[6-FAM]-CCGTCGCAGCCGTCCAACCAACTCAAC	266,660
FAM-27-PThio	DNA	[6-FAM[-CCGTCGCAGCCGTCCAACCAACTACA^*C	267,660
45-Buried MM	DNA	GGACGGCATTGGATCGATGTAGAGTTGGTTGGACGGCTGCGACGG	439,600
45mer	DNA	GGACGGCATTGGATCGATGTGTAGTTGGTTGGACGGCTGCGACGG	435,100
FAM-20	RNA	[6-FAM]-GUCAUUCUCCUAAGAAGCUA	222,360
40mer	RNA	CUAUCCCCAUGUGAUUUUAAUAGCUUCUUAGGAGAAUGAC	403,100

^{* =}

phosphorothioate linkage