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. 2021 Aug 24;11:17084. doi: 10.1038/s41598-021-96609-9

Figure 4.

Figure 4

Image processing and analyzing steps in MATLAB script. (A) Image processing by stacking different channels, droplet tracing, and detection of cells over each channel. (B) Droplet movement over one hour. An adjustable amount of movement is allowed by the script, but if this allowed movement is more than the droplet radius, the risk exists of detecting a different droplet at the next time point. Droplet detection over time is done by comparing the coordinates of the center of the droplet between two consecutive time points and selecting the closest center within the allowed movement range. (C) Evaluation of the script for cells recognition over different channels, here two cells labelled with cell tracker blue are identified in DAPI channel). (D) Validation of the script by comparing differences in cell distribution, cell pairing, and dead cell identification at three different time points (t = 3 h, t = 4 h, and t = 10 h) in-between script generated data with manually counted data.