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. 2021 Jul 7;6(4):e00383-21. doi: 10.1128/mSphere.00383-21

TABLE 1.

Pairwise distances within persistent clusters of L. monocytogenes from dairy farms A to C

Cluster CCa STb CTc N d Farm(s) Pairwise distance (no. of SNPs)
Mean Minimum Maximum
C1 8 8 9176 8 A 1.5 0 4
C2 14 14 9177 34 A 3.6 0 12
C3 14 91 9178 18 A 2.6 0 7
C4 14 91 9179 8 A, B 2 0 6
C5 18 18 9180 8 B 3.3 0 8
C6 18 18 9181 6 B 1.7 0 10
C7 20 20 9182 32 C 2.4 0 7
C8 20 20 9189 5 B 3.5 0 9
C9 20 20 9183 6 A 3.9 0 10
C10 20 20 9184 5 B 2.4 0 6
C11 20 20 9185 9 C 5.8 0 11
C12 20 20 9186 4 B 1.5 0 6
C13 37 37 9187 20 A 2.6 0 7
C14 37 37 9188, 9205 7 A 2.2 0 6
All clusters 2.8 0 8
a

CC, clonal complex.

b

ST, multilocus sequence typing (MLST) profile.

c

CT, core genome multilocus sequence typing (cgMLST) profile.

d

Number of isolates in the persistent cluster.