TABLE 2.

Genomic information of the chromosomes and plasmids of E. coli PK5074 and PK5086 resolved by hybrid assembly strategy

Strain	MLST	Components	Size (bp)	Accession no.	Replicon type(s)	Resistance genes	Virulence-associated gene(s)
PK5074	ST48	PK5074-chromosome	4,746,945	CP072802		mdf(A), dfrA1	gad, ompT, terC
		pPK5074-MCR1	267,744	CP072803	IncHI2, IncHI2A	mcr-1, aph(3′)-Ia, aadA8, lnu(F), sul3, tet(A), aph(6)-Id, floR, ARR-2, dfrA14	terC
		pPK5074-tetX	110,313	CP072807	IncFII	tet(X), aph(3′)-Ia, aph(6)-Id, aadA22, aph(3′')-Ib, sul2, floR, blaTEM-215	traT
		pPK5074-91kb	91,224	CP072806	IncFIB(K)	qnrS2, tet(A), floR, sul2, aph(6)-Id, aph(3′')-Ib	NDa
		pPK5074-69kb	69,302	CP072804	IncY	qnrS1, aph(6)-Id, aph(3′')-Ib, aadA2, aph(3′)-Ia, blaTEM-1B, lnu(F)	ND
		pPK5074-2kb	1,943	CP072805	ColRNA1	None	ND
PK5086	ST410	PK5086-chromosome	4,781,220	CP080370		mdf(A), blaCMY-2	gad, lpfA, terC
		pPK5086-tetX	100,261	CP080371	IncFII	tet(X), fosA4, mph(A), dfrA12, floR, blaTEM-215	traT
		pPK5086-97kb	97,614	CP080372	IncFIB (AP001918), IncFIA, IncQ1, IncFII (pRSB107)	aac(6′)-Ib-cr, aph(3′')-Ib, aph(6)-Id, aadA5, aac(3)-IId, mph(A), dfrA17, sul1, sul2, tet(B), blaTEM-1B, blaOXA-1, blaCTX-M-15	ND
		pPK5086-95kb	95,348	CP080373	IncY	None	ND
		pPK5086-2kb	2,088	CP080374	Col (BS512)	None	ND

^aND, not detected.