TABLE 1.
Saccharibacteria genomes improved using nanopore sequencing in this study
| New MAGa designation | Previous MAG name | Clade | Previous no. of contigs | Previous size (bp) | Updated no. of contigs | Updated size (bp) | Updated longest contig (bp) | Complete | Near complete (longest contig >700,000 bp or <5 contigs) |
|---|---|---|---|---|---|---|---|---|---|
| JB001 | Candidatus_Nanogingivalaceae_FGB1_strain_JCVI_27_bin.3 | G6 | 67 | 704,215 | 1 | 663,355 | 663,355 | X | |
| JB002 | Candidatus_Saccharimonas_sp._strain_JCVI_32_bin.49 | G6 | 14 | 620,057 | 1 | 637,739 | 637,739 | X | |
| JB003 | Candidatus_Nanogingivalaceae_FGB1_strain_JCVI_28_bin.11 | G6 | 34 | 719,702 | 1 | 691,584 | 691,584 | X | |
| TM7c-JB | Candidatus_Nanosynbacter_TM7c_strain_JCVI_32_bin.19 | G1 | 7 | 793,808 | 1 | 793,363 | 793,363 | X | |
| None | Candidatus_Nanosynbacter_sp._TM7_MAG_III_A_2_strain_JCVI_32_bin.12 | G1 | 76 | 696,341 | 8 | 837,467 | 808,188 | X | |
| None | Candidatus_Nanosynbacter_GGB2_strain_JCVI_32_bin.57 | G1 | 32 | 1,040,784 | 6 | 1,054,499 | 762,750 | X | |
| G6_32_bin_33_unicycler | Candidatus_Nanogingivalaceae_FGB1_strain_JCVI_32_bin.33 | G6 | 97 | 521,278 | 31 | 594,688 | 77,761 | ||
| None | Candidatus_Nanosynbacteraceae_FGB1_strain_JCVI_32_bin.22 | G1 | 68 | 636,728 | 35 | 913,508 | 182,700 | ||
| None | Candidatus_Nanosynbacteraceae_FGB2_strain_JCVI_32_bin.44 | G1 | 31 | 725,781 | 15 | 819,428 | 300,554 | ||
| G3_32_bin_36_unicycler | Candidatus_Nanosyncoccus_FGB2_strain_JCVI_32_bin.36 | G3 | 32 | 667,180 | 4 | 688,219 | 265,262 | X |
a
MAG, metagenome-assembled genome.