Table 3.

Similarity percentage of nucleotides and deduced amino acids of Vietnamese Canine circovirus (CanineCV-VN) and reference strains.

Genotype	Strain	Sequence	Similarity (%)
			Full genome	Replicase	Capsid
	UCD1-1698a & CanineCV-VN-3, 4, 5, 8	Nucleotide Amino acid	93.6–94.4	94.7–96.7 95.7–97.3	91.3–92.9 97.0–97.7
	UCD1-1698a & CanineCV-VN-1, 2, 6, 7	Nucleotide Amino acid	88.3–88.5	85.7–86.1 93.7–94.3	89.1–89.6 98.8–95.9
CanineCV-1	CanineCV-VN-3, 4, 5, 8	Nucleotide Amino acid	95.2–98.0	95.3–98.6 96.0–99.3	94.2–99.0 97.0–99.6
CanineCV-3	CanineCV-VN-1, 2, 6, 7	Nucleotide Amino acid	98.9–99.8	98.4–99.8 93.7–100.0	99.0–99.8 98.5–100.0
CanineCV-1 & -3b		Nucleotide Amino acid	86.0–87.2	83.8–85.9 92.7–97.3	85.3–86.8 92.9–97.7

^a Reference strain of CanineCV (Accession no. NC_020904); similarities were compared between UCD1-1698 strains and CanineCV-VN strains.

^b Similarities were compared between Vietnamese CanineCV-1 and -3 genotypes.