Fig. 2. Whole-genome phylogeny of the Lotus and Arabidopsis core culture collections.
Maximum likelihood phylogeny, constructed from a concatenated alignment of 31 conserved, single-copy genes (AMPHORA) showing the taxonomic overlap of the Lj-SPHERE (n = 294, blue track) and At-SPHERE (n = 194, red track) core culture collections. Arrows in the outer rings indicate the strains selected for five mixed communities used in reconstitution experiments.