Table 1. The genome of near-sterile prg-1(−) lines remains intact.
Event type╲Strain | prg1- line 1 (G17 & G18; near-sterile generations) | prg1- line 2 (G6 & G7; near-sterile generations) | wildtype (G18 & G19) |
---|---|---|---|
Coordinates (bp); Genomic feature(s) | Coordinates (bp); Genomic feature(s) | Coordinates (bp); Genomic feature(s) | |
Deletion(s) | chrV: 17095422–7757; Tc3 chrV: 18442315–3924; Tc1 chrV: 18764490–6674; Tc3 |
chrV:2031539–2268; Tc1 | |
Insertions | chrI:11851623; 3’ UTR (Y47H9C.4) chrV: 1704037; EX (F28B1.11) chrV:2912079; IN (C31B8.9) chrV:9440092; IN chrV: 16898168; IG |
chrI:14231904; IN chrII:821148; EX (linc-38) chrII:6617021; IN chrV:11614774; 3’ UTR (F35B12.6) |
|
Base-substitutions | chrI:779206, C > G; IG chrI:779257, G > A ; IG chrI:962711, A > T; IG chrI:1793064, G > T; IG chrI:2031543, C > T; IN chrI:2419142, C > T; IN chrI:2618437, G > A; IN |
chrI:659791, C > T; IG chrII:14065299, A > G; IN chrIII:1142305, G > A; IN chrIII:1142307, T> A ; IN chrIII:2261606, G > A ; IG chrIII:11851768, T >C; IG chrIII:13012511, C >T; IG |
chrI:918075, A > G; IN chrI:918082, C > T; IN chrI:918083, T >A;IN chrI:918084, T > C; IN chrI:918085, T > A; IN chrI:4543651, A > G; IG chrII:806841, C > T; IG |
chrI:3191147, A > G; IN chrI:3191150, G > A; IN chrI: 10947314, A > C; IG chrI:13860805, C > T; IN chrI:13860836, G > C; IN chrII:1334049, G > T; IN chrII:3781926, C > A; IG chrII:4109324, A > G; EX chrII:6007756, A > G; IG chrIII:11851768, T > C; IN chrIII:12246367, G > A; IN chrIII:12730229, C > T; IN chrIV:5461535, C > T; IG chrIV:13314949, T > A; IG chrIV: 16826420, A > G; IG chrV:579311, A > G; IG chrV:893540, T > C; IG chrV:921961, A > T; IG chrV:2247702, A > G; EX chrV: 11176911, T > G; IG chrV: 13104806, T > A; IN chrV: 15433994, A > G; IG chrX:601560, C > G; IG chrX: 1203242, C > T; IN chrX: 1203247, T > A; IN chrX: 1709668, C > T; IG chrX: 1709685, G >T; IG chrX: 1743630, T > C; IG |
chrIV:14831577, A >C; IG chrIV:14992702, G >T; IN chrIV: 17011592, A >T; IN chrIV: 17011596, A >T; IN chrV:2079258, G > C; IG chrV:7523854, T > G ; EX chrV: 17772779, A > T; IN chrX: 1653446, C> A; IN |
chrII:1287350, A > C; IG chrII:2570731, A > G; IN chrII:5968729, G > A; IN chrII:8980145, C > G; IN chrII:15049872.T >C; IG chrIII:2596101, T >A; IN chrIII:7501538, A>C; EX chrIII:11114290,A>G; IG chrIII:11114332, A>G; IG chrIII:11938744, A>T; IN chrIII:11938752, A > T; IN chrIV:1054199, G > A;EX chrIV:8863506, C > T; IN chrIV: 10321932, T > G;IG chrV:3424941, C> T; IG chrV: 18882820, A > C; IN chrX: 1308538, A > C; IG chrX:2791251, A> G; IN chrX:3225128, T > G; IG chrX:7747753, G > T; IN chrX:8203278, A > G; IN |