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. Author manuscript; available in PMC: 2022 Aug 23.
Published in final edited form as: Dev Cell. 2021 Aug 12;56(16):2295–2312.e6. doi: 10.1016/j.devcel.2021.07.014

Table 1. The genome of near-sterile prg-1(−) lines remains intact.

Summary of deletions, insertions and base substitutions accumulated in near-sterile prg-1(−) lines. All insertions detected in prg-1(−) lines are Tc3 insertion. Overlapping genomic features are categorized as exonic (EX), intronic (IN), genic 5’/3’ untranslated region (UTR) or intergenic (IG). For base substitutions the original and mutated bases are listed.

Event typeStrain prg1- line 1 (G17 & G18; near-sterile generations) prg1- line 2 (G6 & G7; near-sterile generations) wildtype (G18 & G19)
Coordinates (bp); Genomic feature(s) Coordinates (bp); Genomic feature(s) Coordinates (bp); Genomic feature(s)
Deletion(s) chrV: 17095422–7757; Tc3
chrV: 18442315–3924; Tc1
chrV: 18764490–6674; Tc3
chrV:2031539–2268; Tc1
Insertions chrI:11851623; 3’ UTR (Y47H9C.4)

chrV: 1704037; EX (F28B1.11)

chrV:2912079; IN (C31B8.9)

chrV:9440092; IN
chrV: 16898168; IG
chrI:14231904; IN
chrII:821148; EX (linc-38)
chrII:6617021; IN
chrV:11614774; 3’ UTR (F35B12.6)
Base-substitutions chrI:779206, C > G; IG
chrI:779257, G > A ; IG
chrI:962711, A > T; IG
chrI:1793064, G > T; IG
chrI:2031543, C > T; IN
chrI:2419142, C > T; IN
chrI:2618437, G > A; IN
chrI:659791, C > T; IG
chrII:14065299, A > G; IN
chrIII:1142305, G > A; IN
chrIII:1142307, T> A ; IN
chrIII:2261606, G > A ; IG
chrIII:11851768, T >C; IG
chrIII:13012511, C >T; IG
chrI:918075, A > G; IN
chrI:918082, C > T; IN
chrI:918083, T >A;IN
chrI:918084, T > C; IN
chrI:918085, T > A; IN
chrI:4543651, A > G; IG
chrII:806841, C > T; IG
chrI:3191147, A > G; IN
chrI:3191150, G > A; IN
chrI: 10947314, A > C; IG
chrI:13860805, C > T; IN
chrI:13860836, G > C; IN
chrII:1334049, G > T; IN
chrII:3781926, C > A; IG
chrII:4109324, A > G; EX
chrII:6007756, A > G; IG
chrIII:11851768, T > C; IN
chrIII:12246367, G > A; IN
chrIII:12730229, C > T; IN
chrIV:5461535, C > T; IG
chrIV:13314949, T > A; IG
chrIV: 16826420, A > G; IG
chrV:579311, A > G; IG
chrV:893540, T > C; IG
chrV:921961, A > T; IG
chrV:2247702, A > G; EX
chrV: 11176911, T > G; IG
chrV: 13104806, T > A; IN
chrV: 15433994, A > G; IG
chrX:601560, C > G; IG
chrX: 1203242, C > T; IN
chrX: 1203247, T > A; IN
chrX: 1709668, C > T; IG
chrX: 1709685, G >T; IG
chrX: 1743630, T > C; IG
chrIV:14831577, A >C; IG
chrIV:14992702, G >T; IN
chrIV: 17011592, A >T; IN
chrIV: 17011596, A >T; IN
chrV:2079258, G > C; IG
chrV:7523854, T > G ; EX
chrV: 17772779, A > T; IN
chrX: 1653446, C> A; IN
chrII:1287350, A > C; IG
chrII:2570731, A > G; IN
chrII:5968729, G > A; IN
chrII:8980145, C > G; IN
chrII:15049872.T >C; IG
chrIII:2596101, T >A; IN
chrIII:7501538, A>C; EX
chrIII:11114290,A>G; IG
chrIII:11114332, A>G; IG
chrIII:11938744, A>T; IN
chrIII:11938752, A > T; IN
chrIV:1054199, G > A;EX
chrIV:8863506, C > T; IN
chrIV: 10321932, T > G;IG
chrV:3424941, C> T; IG
chrV: 18882820, A > C; IN
chrX: 1308538, A > C; IG
chrX:2791251, A> G; IN
chrX:3225128, T > G; IG
chrX:7747753, G > T; IN
chrX:8203278, A > G; IN