REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Chemicals, peptides, and recombinant proteins | ||
Q5 High-Fidelity Polymerase | NEB | Cat# M0491S |
PolyJet | SignaGen | Cat# SL100688 |
DNase I | Thermo Fisher | Cat# EN0525 |
Poly-D-Lysine | Sigma-Aldrich | Cat# P6407 |
Lipofectamine LTX | Invitrogen | Cat# 15338500 |
Puromycin | Sigma-Aldrich | Cat# P8833 |
BSA | Roche | Cat# 10738328103 |
HEPES | Sigma-Aldrich | Cat# H3375 |
EDTA | Sigma-Aldrich | Cat# E6758 |
DAPI | Thermo Fisher | Cat# D21490 |
Forskolin | Calbiochem | Cat# 344281 |
IBMX | Sigma-Aldrich | Cat# I7018 |
Critical commercial assays | ||
TOPO PCR Vector | Invitrogen | Cat# K450002 |
DNeasy Blood and Tissue Kit | QIAGEN | Cat# 69504 |
Q5 High-Fidelity PCR Kit | NEB | Cat #E0555S |
PureLink Quick Gel Extraction Kit | Thermo Fisher | Cat# K220001 |
35-mm Glass bottom imaging dish | Cellvis | Cat# D35-20-1.5-N |
Deposited data | ||
FluoSTEP-ICUE sequence | GenBank | MT800777.1 |
FluoSTEP-AKAR sequence | GenBank | MT800778.1 |
Experimental models: Cell lines | ||
HEK293T | ATCC | ATTC Cat# CRL-11268 |
HEK293A | Thermo Fisher | Cat# R70507 |
293-RIα | (Zhang et al., 2020) | N/A |
Oligonucleotides | ||
293-RIα cell line validation F | 5′-TTTGTTGAAGTGGGAAGATTGG-3′ | N/A |
293-RIα cell line validation R | 5′-TCAATAGGTGCTGGGATCTGC-3′ | N/A |
IDT Ultramer for generation of 293-RIα cell line | 5′-GTTCTTGGCCCATGCTCAGACATCCTC AAACGAAACATACAGCAGTACAACAGTT TTGTGTCACTGTCTGTCGGTGGCGGCCG TGACCACATGGTCCTTCATGAGTATGTA AATGCTGCTGGGATTACATGAAATCTGC CTCCTGTGCCTCCCTTTTCTCCTCTCCCC AATCCATGCTTCACTCATGCAAACTGCTTTAT-3′ |
N/A |
Recombinant DNA | ||
px459 | (Ran et al., 2013) | Addgene plasmid #62988 |
px459 human RIα gRNA | (Zhang et al., 2020) | N/A |
pcDNA3.1 GFP1-10 | (Kamiyama et al., 2016) | Addgene plasmid #70219 |
pcDNA3.1 FluoSTEP-AKAR | (Zhang et al., 2020) | N/A |
pcDNA3.1 FluoSTEP-ICUE | (Zhang et al., 2020) | N/A |
pcDNA3.1 FluoSTEP-AKAR(T/A) | (Zhang et al., 2020) | N/A |
pcDNA3.1 FluoSTEP-ICUE(R279E) | (Zhang et al., 2020) | N/A |
Software and algorithms | ||
Prism | GraphPad | https://www.graphpad.com/scientific-software/prism/ |
ImageJ | NIH | https://imagej.nih.gov |
Other | ||
Zeiss Axiovert 200M Microscope | Carl Zeiss | N/A |
ORCA-flash4.0LT digital CMOS camera | Hamamatsu | C11440-42U30 |
Lambda 10-2 filter changer | Sutter Instruments | LB10-B/IQ |