Table 4.
(A) Correlations of within-population trait-associated diversity criterion (HeA) with mean climate and climate variability indicators at sites of origin of populations. Trait abbreviations are explained in Table 2. (B) 90, 95, 99 and 100 % quantiles of the absolute values of the correlations between allele diversity (HeSNP) at the 189 781 genotyped SNP loci and the mean climate and climate variability indicators. Since most genotyped SNP loci are expected to be neutral, the quantile values are expected to report the distribution of correlations of allele diversity at neutral loci with mean climate indicators
Climate indicator | |||||||||
---|---|---|---|---|---|---|---|---|---|
Mean climate indicator | Climate variability indicator | ||||||||
HeA/quantile | meanPC1 | meanPC2 | meanPC3 | meanPC4 | stdPC1 | stdPC2 | stdPC3 | stdPC4 | |
(A) | HeA_AHD | 0.38 | 0.08 | 0.34 | 0 | 0.24 | 0.37 | −0.13 | 0.04 |
HeA_HDT | −0.19 | 0.2 | −0.05 | −0.06 | 0.06 | −0.14 | 0.31 | 0.21 | |
HeA_HFY | 0.46 | 0.29 | 0.17 | −0.13 | 0.54 | 0.18 | −0.15 | −0.1 | |
HeA_SPH | 0.11 | 0.27 | 0.07 | 0 | 0.31 | 0.01 | 0.12 | 0.12 | |
HeA_SMH | 0.39 | −0.04 | 0.34 | 0.01 | 0.22 | 0.44 | −0.26 | −0.23 | |
HeA_WGS | 0.33 | 0.25 | 0.41 | 0.02 | 0.41 | 0.44 | −0.01 | −0.03 | |
HeA_YCH | 0.08 | 0.48 | −0.06 | −0.24 | 0.47 | −0.14 | 0.17 | 0.11 | |
(B) | 90 % | 0.23 | 0.24 | 0.22 | 0.18 | 0.28 | 0.26 | 0.16 | 0.18 |
95 % | 0.27 | 0.29 | 0.27 | 0.21 | 0.34 | 0.31 | 0.2 | 0.21 | |
99 % | 0.35 | 0.37 | 0.35 | 0.27 | 0.45 | 0.4 | 0.27 | 0.28 | |
100 % | 0.56 | 0.57 | 0.54 | 0.43 | 0.68 | 0.63 | 0.44 | 0.41 |
For a genotyped SNP locus and a population, HeSNP = 2 × p × q, where p and q are the alternative and reference allele frequencies, respectively, within the population.