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. 2021 Jul 14;17(8):5287–5300. doi: 10.1021/acs.jctc.1c00177

Figure 8.

Figure 8

Free energy profiles and evolution of the binding free energy, ΔGb, changing the x* frame for the CB8-G6 (a and b) and the CB8-G8 (c and d) systems. For CB8-G6, the x* frame corresponds to the first inflection point encountered moving from the bound state (b, point B). In the PMF (a), it identifies the first energy barrier. For CB8-G8, because only one inflection point (d, point F) is observed between the bound (d, point E) and unbound (d, point G) states of the system, the x* frame is fixed between the two well-defined inflection points (d, points E and F). In this case, in the PMF (c), the x* frame corresponds to a not-sampled intermediate state between the lowest energy minimum (bound state) and the plateau corresponding to the solvated state of the system.