| 8-oxo-dG | 8-oxo-2′-deoxyguanosine |
| ACAN-/- | deletion of aggrecan in homozygous mouse |
| ACC | anterior cingulate cortex |
| AD | Alzheimer’s disease |
| ALS | amyotrophic lateral sclerosis |
| AP-1 | activator protein 1 |
| ASD | autism spectrum disorder |
| BBB | blood–brain barrier |
| BCAN-/- | deletion of brevican in homozygous mouse |
| BDNF | brain-derived neurotrophic factor |
| Bral2/HAPLN-4 | brain link protein |
| C4S | chondroitin 4 sulfate |
| C6S | chondroitin 6 sulfate |
| CNS | central nervous system |
| Crtl-1/HAPLN-1 | cartilage link protein |
| CSF | cerebrospinal fluid |
| CSPGs | chondroitin sulfate proteoglycans |
| CSs | chondroitin sulfates |
| CTTNBP2 | cortactin binding protein 2 |
| DNTfR1 | dominant negative nonfunctional transferrin receptor-1 |
| EAE | experimental autoimmune encephalomyelitis |
| ECM | extracellular matrix |
| FMRP | fragile X mental retardation protein |
| FXS | fragile-X-syndrome |
| GAG | glycosaminoglycan |
| GSH | glutathione |
| GSSG | glutathione disulfide |
| HA | hyaluronic acid |
| HAPLN1-/- | deletion of cartilage link protein in homozygous mouse |
| HAS | hyaluronan synthase |
| KO | knockout |
| LTP | long-term potentiation |
| MMP | matrix metalloproteinase |
| MT | metallothionein |
| NMDA | N-methyl-D-aspartate |
| Otx2 | orthodenticle homeobox 2 |
| PBS | phosphate buffer solution |
| PD | Parkinson’s disease |
| PD | postnatal day |
| PGs | proteoglycan proteins |
| PNNs | perineuronal nets |
| PTR | proteoglycan tandem repeat |
| PV | parvalbumin |
| RNS | reactive nitrogen species |
| ROS | reactive oxygen species |
| SOD | superoxide dismutase |
| TfR1 | normally-functioning transferrin receptor-1 |
| TGN | trans-Golgi network |
| TIMP | tissue inhibitor of MMPs |
| TN-R | tenascin-R |
| tPA | tissue plasminogen activator |
| RS-XRF | rapid scanning x-ray fluorescence spectroscopic imaging |
| WFA | Wisteria floribunda agglutinin |
| XFM | X-ray fluorescence microscopy |