Skip to main content
. Author manuscript; available in PMC: 2022 Mar 1.
Published in final edited form as: J Pathol. 2021 Jan 5;253(3):268–278. doi: 10.1002/path.5590

Table 1.

HistoQC modules.

Module name Targeted artifact or metric
Basic Module WSI magnification, file pyramid levels and microns per pixel
Light Dark Module Identify tissue location and folded tissue
Classification Module Identify pen marking, cover slip and cracks
Bubble Region By Region Demarcate contours of air bubbles on WSIs
Bright Contrast Module Overall and per channel tissue brightness, indicating stain/scan variations
Blur Detection Module Identifies out of focus WSI regions