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CR1-rng-containing transcripts (A,B) and mobilome contigs (C,D). Open reading frames (ORFs, grey boxes), Repbase-annotated fragments (black boxes), and transposon names are shown. Predicted conserved domains: RT—reverse transcriptase; EEP—exonuclease/endonuclease/phosphatase; PHD—plant homeodomain. Asterisks indicate the position of the match with CR1-rng. Transcripts that do not contain any conserved domains are not shown.
