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Content of repetitive elements in the primary sequence of the genome and in the transcriptome of H. elongata.
| Repetitive Element | RepeatExplorer2 Results (Predicted Proportion in Genome, %) | RepeatMasker Search in RepeatExplorer2 Assembled Contigs (% in Mobilome Assembly) | Repeat Masker Search in Transcriptome Contigs (% in Assembly) |
|---|---|---|---|
| LINE | 20.85 | 21.75 | 5.27 |
| Penelope | 0.08 | 0.75 | - |
| LTR | 14.28 | 18.75 | 2.77 |
| DNA transposons | - | 1.95 | 0.63 |
| Unclassified repeats | 4.6 | 14.65 | 5.77 |
| Simple repeats | 4.39 | 1.5 | - |
