Fig. 4.

Module-to-module co-expression changes using permutations for a DiffCoEx_NA, b DiffCoEx_AA, and c DiffCoEx_AH. This figure is the result of the significance analyses. After 1000 permutations of the samples between every two conditions, the dispersion values were computed for each module and every possible module pair. The number in each cell shows the p-value (number/1000) identified for the within-module co-expression change. Black cells show significant p-value and light grey modules represent insignificant p value