Skip to main content
. 2021 Aug 3;12(8):1203. doi: 10.3390/genes12081203
AIC Akaike’s Information Criterion
AS-PCR Allele-specific polymerase chain reaction
BSA Bulked segregant analysis
EBV Estimated breeding value
ED Euclidean distance
ELFN1 Extracellular leucine-rich repeat and fibronectin type III domain containing 1 gene
FDR False discovery rate
GATK Genome analysis toolkit
GC (%) The percentage of G and C bases in the total bases in the sequencing results
GWASs Genome-wide association studies
HMX1 H6 family homeobox 1 gene
LRRFIP1 LRR binding FLII interacting protein 1 gene
MW Marketing weight (body weight at nine weeks of age)
P1 First population
P2 Second population
PDGFD Platelet-derived growth factor D gene
PPP2R2C Protein phosphatase 2 regulatory subunit B γ gene
Q30 (%) The percentage of bases with a sequencing quality value greater than or equal to 30
SAMtools Sequence alignment/map format
SLAF-seq Specific locus amplified fragment sequencing
SNPs Single nucleotide polymorphisms
SOAP Short oligonucleotide alignment program
SSCP Single-strand conformation polymorphism
ti/tv Transition/transversion ratio
UCHL1 Ubiquitin C-terminal hydrolase L1 gene