AIC |
Akaike’s Information Criterion |
AS-PCR |
Allele-specific polymerase chain reaction |
BSA |
Bulked segregant analysis |
EBV |
Estimated breeding value |
ED |
Euclidean distance |
ELFN1
|
Extracellular leucine-rich repeat and fibronectin type III domain containing 1 gene |
FDR |
False discovery rate |
GATK |
Genome analysis toolkit |
GC (%) |
The percentage of G and C bases in the total bases in the sequencing results |
GWASs |
Genome-wide association studies |
HMX1
|
H6 family homeobox 1 gene |
LRRFIP1
|
LRR binding FLII interacting protein 1 gene |
MW |
Marketing weight (body weight at nine weeks of age) |
P1 |
First population |
P2 |
Second population |
PDGFD
|
Platelet-derived growth factor D gene |
PPP2R2C
|
Protein phosphatase 2 regulatory subunit B γ gene |
Q30 (%) |
The percentage of bases with a sequencing quality value greater than or equal to 30 |
SAMtools |
Sequence alignment/map format |
SLAF-seq |
Specific locus amplified fragment sequencing |
SNPs |
Single nucleotide polymorphisms |
SOAP |
Short oligonucleotide alignment program |
SSCP |
Single-strand conformation polymorphism |
ti/tv |
Transition/transversion ratio |
UCHL1
|
Ubiquitin C-terminal hydrolase L1 gene |