| AIC | Akaike’s Information Criterion |
| AS-PCR | Allele-specific polymerase chain reaction |
| BSA | Bulked segregant analysis |
| EBV | Estimated breeding value |
| ED | Euclidean distance |
| ELFN1 | Extracellular leucine-rich repeat and fibronectin type III domain containing 1 gene |
| FDR | False discovery rate |
| GATK | Genome analysis toolkit |
| GC (%) | The percentage of G and C bases in the total bases in the sequencing results |
| GWASs | Genome-wide association studies |
| HMX1 | H6 family homeobox 1 gene |
| LRRFIP1 | LRR binding FLII interacting protein 1 gene |
| MW | Marketing weight (body weight at nine weeks of age) |
| P1 | First population |
| P2 | Second population |
| PDGFD | Platelet-derived growth factor D gene |
| PPP2R2C | Protein phosphatase 2 regulatory subunit B γ gene |
| Q30 (%) | The percentage of bases with a sequencing quality value greater than or equal to 30 |
| SAMtools | Sequence alignment/map format |
| SLAF-seq | Specific locus amplified fragment sequencing |
| SNPs | Single nucleotide polymorphisms |
| SOAP | Short oligonucleotide alignment program |
| SSCP | Single-strand conformation polymorphism |
| ti/tv | Transition/transversion ratio |
| UCHL1 | Ubiquitin C-terminal hydrolase L1 gene |