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. Author manuscript; available in PMC: 2021 Sep 1.
Published in final edited form as: Nat Neurosci. 2021 Feb 1;24(3):297–311. doi: 10.1038/s41593-020-00778-1

Table 1.

Comparing gene-therapy strategies for neurodegenerative diseases

ASOs AAVs/other viruses Small molecules DNA/RNA editing
Risk/toxicity • Intrathecal/invasive local CNS delivery is necessary.
• Hepatotoxicity and dorsal root ganglion pathology after systemic delivery (particularly with high doses).
• May need intrathecal/invasive local CNS delivery, though intravenous route is feasible.
• Insertional mutagenesis.
• Possible altered splicing/expression of off-target genes (e.g. high dose of SMN2 splicing modulator risdiplam affects FOXM1 splicing, leading to a protein product that blocks cell division). • Irreversibility of DNA editing
• Undesired on-target editing possible (large deletions and chromosomal rearrangements).
• Possible immunogenicity from bacterial nucleases (Cas-proteins).
Off-target effects Binding to off-target mRNA due to complete or partial complementarity. Ectopic expression in peripheral tissues after systemic delivery. Non-specific binding to off-target mRNA possible. Binding to off-target site due to homologous sequence or mismatch tolerance.
Persistence of intervention • Repeated administration necessary for persistent RNA modulation. • Long-term transgene expression of AAV in postmitotic cells.
• Long-term transgene expression of lentivirus in mitotically active and inactive cells.
• Pre-existing neutralizing antibodies may reduce efficacy.
• Immunogenicity of viral capsids and transgene products may affect long-term gene expression and repeated treatments.
• Repeated oral administration necessary, typically low brain availability. • Persistent genome manipulation by DNA-editing tools.