Table 1.
Number of M. bovis strains within each SNP clade (A to E) and identification of clade-defining and clade-monomorphic SNP sites.
| SNP Clade | Total SNP Sites | Clade-Defining SNP Sites (a) | Clade-Monomorphic SNP Sites (b) |
|---|---|---|---|
| A (n = 14) | 622 | 108 | - |
| B (n = 11) | 611 | 133 | - |
| C (n = 3) | 320 | 184 | 49 |
| D (n = 6) | 372 | 217 | 82 |
| E (n = 10) | 431 | 360 | 352 |
| A to D (n = 34) | 1419 | 1411 | 106 |
(a) Polymorphic positions present only in the clade members. (b) Polymorphic positions present only in the clade members and common to all members.