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. 2021 Jul 30;9(8):1629. doi: 10.3390/microorganisms9081629

Figure 2.

Figure 2

High-resolution maximum-likelihood phylogenetic tree including 125 M. bovis and 52 M. caprae isolates recovered from livestock and wildlife in Catalonia, Spain, between 2008 and 2018. Clades, clonal complexes, and host type are identified according to the legend. Isolate tags include isolate ID and year of isolation. The spoligotypes for all isolates are given. Displayed in the columns on the right. The M. caprae clade is collapsed (gray circle). M. bovis reference strains (M. bovis AF2122/97, M. bovis Ravenel, M. bovis AN5, and M. bovis BCG) are included for perspective. The scale bar represents a branch length of 90 SNPs.