Table 1.
Species | Strain/Voucher No. | GenBank Accession Numbers | References | ||||
---|---|---|---|---|---|---|---|
ITS | LSU | SSU | tef1-α | rpb2 | |||
Alternaria alternata | CBS 916.96 T | AF347031 | DQ678082 | KC584507 | KC584634 | KC584375 | [35] |
Alternaria aconidiophora | CBS 145419 T | LR133931 | – | – | LR133968 | LR133967 | [36] |
Alternaria dactylidicola | MFLUCC 15-0466 T | KY703616 | KY703617 | KY703618 | – | KY750720 | [37] |
Alloleptosphaeria clematidis | MFLUCC 17-2071 T | MT310604 | MT214557 | MT226674 | MT394736 | MT394685 | [38] |
Astragalicola amorpha | CBS 142999 T | MF795753 | MF795753 | – | MF795842 | MF795795 | [39] |
Astragalicola vasilyevae | MFLUCC 17-0832 T | MG828870 | MG828986 | MG829098 | MG829193 | MG829248 | [40] |
Bambusicola bambusae | MFLUCC 11-0614 T | JX442031 | JX442035 | JX442039 | KP761722 | KP761718 | [41,42] |
Bambusicola irregularispora | MFLUCC 11-0437 T | JX442032 | JX442036 | JX442040 | KP761723 | KP761719 | [41,42] |
Bambusicola massarinia | MFLUCC 11-0389 T | JX442033 | JX442037 | JX442041 | KP761725 | KP761716 | [41,42] |
Bambusicola splendida | MFLUCC 11-0439 T | JX442034 | JX442038 | JX442042 | KP761726 | KP761717 | [41,42] |
Bambusicola didymospora | MFLUCC 10-0557 T | KU940116 | KU863105 | KU872110 | KU940188 | KU940163 | [30] |
Bambusicola pustulata | MFLUCC 15-0190 T | KU940118 | KU863107 | KU872112 | KU940190 | KU940165 | [30] |
Bambusicola thailandica | MFLUCC 11-0147 T | KU940119 | KU863108 | KU872113 | KU940191 | KU940166 | [30] |
Bambusicola triseptatispora | MFLUCC 11-0166 T | KU940120 | KU863109 | – | – | KU940167 | [30] |
Bambusicola dimorpha | MFLUCC 13-0282 T | KY026582 | KY000661 | KY038354 | – | KY056663 | [37] |
Bambusicola loculata | MFLUCC 13-0856 T | KP761732 | KP761729 | KP761735 | KP761724 | KP761715 | [42] |
Bambusicola sichuanensis | SICAUCC 16-0002 T | MK253473 | MK253532 | MK253528 | MK262828 | MK262830 | [43] |
Bambusicola subthailandica | SICAU 16-0005 T | MK253474 | MK253533 | MK253529 | MK262829 | MK262831 | [43] |
Boeremia coffeae | CBS 109183 | GU237748 | GU237943 | – | KY484678 | KT389566 | [44] |
Boeremia rhapontica | CBS 113651 T | KY484662 | – | – | KY484713 | – | [44] |
Boeremia opuli | CGMCC 3.18354 T | KY742045 | KY742199 | – | – | KY742133 | [44] |
Boeremia linicola | CBS 116.76 T | GU237754 | GU237938 | – | KY484705 | KT389574 | [44] |
Boeremia populi | CBS 100167 T | GU237707 | GU237939 | – | KY484706 | – | [44] |
Coniothyrium telephii | UTHSC DI16-189 | LT796830 | LN907332 | – | – | LT796990 | [45] |
Coniothyrium chiangmaiense | MFLUCC 16-0891 T | KY568987 | KY550384 | KY550385 | – | KY607015 | [37] |
Coniothyrium sidae | CBS 135108 T | KF251149 | KF251653 | – | KF253109 | KF252158 | [46] |
Cucurbitaria berberidis | CBS 363.93 | JF740191 | GQ387606 | – | – | – | [47] |
Decorospora gaudefroyi | CBS 332.63 | AF394541 | – | AF394542 | – | – | [48] |
Didymella poaceicola | MFLUCC 13-0212 T | KX965726 | KX954395 | – | – | KX898364 | [37] |
Dothidotthia robiniae | MFLUCC 16-1175 T | MK751727 | MK751817 | MK751762 | MK908017 | MK920237 | [49] |
Epicoccum thailandicum | MFLUCC 16-0892 T | KY703619 | KY703620 | – | – | – | [37] |
Epicoccum poaceicola | MFLUCC 15-0448 T | KX965727 | KX954396 | – | – | KX898365 | [37] |
Leptosphaeria cichorium | MFLUCC 14-1063 T | KT454720 | KT454712 | KT454728 | – | – | [50] |
Nothophoma chromolaenae | MFLUCC 17-1443 T | MT214364 | MT214458 | MT214410 | – | – | [51] |
Ophiosimulans tanaceti | MFLUCC 14-0525 T | KU738890 | KU738891 | KU738892 | MG520910 | – | [52,53] |
Palmiascoma gregariascomum | MFLUCC 11-0175 T | KP744452 | KP744495 | KP753958 | – | KP998466 | [54] |
Parafenestella austriaca | CBS 145262 T | MK356304 | MK356304 | – | MK357576 | MK357532 | [55] |
Parafenestella alpina | CBS 145263 T | MK356302 | MK356302 | – | MK357574 | MK357530 | [55] |
Paraophiobolus plantaginis | MFLUCC 17-0245 T | KY797641 | KY815010 | KY815012 | MG520913 | – | [53] |
Phaeosphaeria ampeli | MFLUCC 18-1641 T | MK503797 | MK503808 | MK503814 | MK503802 | – | [56] |
Podonectria coccicola | DAR 81026 | KU587798 | KU519419 | – | – | – | [5] |
Podonectria coccicola | PUcS15 | KU720533 | KU519420 | – | – | – | [5] |
Podonectria novae-zelandiae | PUcS14 | KU720535 | KU559551 | – | – | – | [5] |
Podonectria novae-zelandiae | PUcS13 | KU720538 | KU559548 | – | – | – | [5] |
Podonectria novae-zelandiae | PUcS12 | KU720537 | KU529802 | – | – | – | [5] |
Podonectria novae-zelandiae | PUcS11 | KU720536 | KU568479 | – | – | – | [5] |
Podonectria sichuanensis | SICAU 16-0003 T | MK305903 | MK296471 | MK296467 | MK313852 | MK313855 | [12] |
Podonectria sichuanensis | SICAUCC 21-0001 | MW484988 | MW462899 | MW462891 | MW462111 | MW462118 | This study |
Podonectria kuwanaspidis | SICAUCC 21-0002 T | MW484989 | MW462900 | MW462892 | MW462112 | MW462119 | This study |
Podonectria kuwanaspidis | SICAUCC 21-0003 | MW484990 | MW462901 | MW462893 | MW462113 | MW462120 | This study |
Podonectria novae-zelandiae | SICAUCC 21-0004 | MW484991 | MW462902 | MW462894 | MW462114 | MW462121 | This study |
Podonectria novae-zelandiae | SICAUCC 21-0005 | MW484992 | MW462903 | MW462895 | MW462115 | MW462122 | This study |
Podonectria kuwanaspidis | SICAUCC 21-0007 | MW484994 | MW462905 | MW462897 | MW462116 | MW462123 | This study |
Pseudoophiobolus galii | MFLUCC 17-2257 T | MG520947 | MG520967 | MG520989 | MG520926 | – | [53] |
Pseudopyrenochaeta lycopersici | CBS 306.65 T | AY649587 | EU754205 | – | – | LT717680 | [57] |
Pseudopyrenochaeta terrestris | CBS 282.72 T | LT623228 | LT623216 | – | – | LT623287 | [57] |
Sclerenchymomyces clematidis | MFLUCC 17-2180 T | MT310605 | MT214558 | MT226675 | MT394737 | MT394686 | [38] |
Seltsamia ulmi | CBS 143002 T | MF795794 | MF795794 | MF795794 | MF795882 | MF795836 | [39] |
Thyrostroma lycii | MFLUCC 16-1170 T | MK751734 | MK751824 | MK751769 | MK908024 | MK920241 | [49] |
Thyrostroma robiniae | MFLUCC 18-1191 T | MK751735 | MK751825 | MK751770 | MK908025 | MK920242 | [49] |
Tubeufia javanica | MFLUCC 12-0545 T | KJ880034 | KJ880036 | KJ880035 | KJ880037 | – | [58] |
Tubeufia chiangmaiensis | MFLUCC 11-0514 T | KF301530 | KF301538 | KF301543 | KF301557 | – | [58] |
Notes: The superscript T represents ex-type or ex-epitype isolates. “–” means that the sequence is missing or unavailable. New sequences are listed in bold. Abbreviations. CBS: Centraalbureau voor Schimmelcultures, Utrecht, Netherlands; CGMCC: China General Microbiological Culture Collection Center; DAR: New South Wales Plant Pathology Herbarium, Orange Agricultural Institute, Orange, NSW, Australia; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; PUcS: unspecified; UTHSC: Fungus Testing Laboratory of the University of Texas Health Science Center at San Antonio, San Antonio, TX, USA; SICAUCC: Sichuan Agricultural University Culture Collection, Sichuan, China; SICAU: Herbarium of Sichuan Agricultural University, Sichuan, China.