Table 2.
Species | Strain/Voucher No. | GenBank Accession No. | References | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
acl1 | act | cmdA | his3 | ITS | LSU | rpb1 | rpb2 | tef1-α | tub2 | |||
Cosmospora coccinea | CBS 341.70 T | HQ897913 | KM231221 | KM231398 | KM231550 | HQ897827 | KM231692 | KM232242 | HQ897777 | KM231947 | KM232086 | [18,19] |
Cosmospora cymosa | CBS 762.69 T | HQ897914 | KM231222 | KM231399 | KM231551 | HQ897828 | KM231693 | KM232243 | HQ897778 | KM231948 | KM232087 | [18,19] |
Dialonectria episphaeria | CBS 125494 = TG 2006-11 | HQ897892 | KM231227 | KM231404 | KM231556 | HQ897811 | KM231697 | KM232248 | HQ897756 | KM231953 | KM232092 | [18,19] |
Dialonectria ullevolea | CBS 125493 = TG 2007-56 | HQ897918 | KM231226 | KM231403 | KM231555 | KM231821 | KM231696 | KM232247 | HQ897782 | KM231952 | KM232091 | [18,19] |
Fusicolla acetilerea | BBA 63789 T = IMI 181488 = NRRL20827 | KM231065 | – | – | – | HQ897790 | U88108 | – | HQ897701 | – | – | [18] |
Fusicolla aquaeductuum | CBS 837.85 = BBA 64559 = NRRL 20865 | KM231067 | - | KM231406 | - | KM231823 | KM231699 | KM232250 | HQ897744 | KM231955 | KM232094 | [19] |
Fusicolla epistroma | BBA 62201 T = IMI 85601 = NRRL 20439 | KM231069 | – | – | – | – | AF228352 | – | HQ897765 | – | – | [18] |
Fusicolla matuoi | CBS 581.78 = ATCC 18694 = MAFF 238445 = NRRL 20427 | KM231070 | KM231228 | KM231405 | KM231557 | KM231822 | KM231698 | KM232249 | HQ897720 | KM231954 | KM232093 | [18,19] |
Macroconia papilionacearum | CBS 125495 | HQ897912 | KM231233 | KM231411 | KM231561 | HQ897826 | KM231704 | KM232254 | HQ897776 | KM231958 | KM232096 | [18,19] |
Macroconia leptosphaeriae | CBS 717.74 | KM231062 | KM231236 | KM231414 | KM231564 | KM231827 | KM231707 | KM232257 | KM232390 | JF735695 | KM232099 | [18,19] |
Macroconia leptosphaeriae | CBS 100001 = CBS H-6030 | KM231063 | KM231234 | KM231412 | KM231562 | HQ897810 | KM231705 | KM232255 | HQ897755 | KM231959 | KM232097 | [18,19] |
Microcera coccophila | CBS 310.34 = NRRL 13962 | HQ897843 | KM231232 | KM231410 | KM231560 | HQ897794 | KM231703 | – | HQ897705 | JF740692 | – | [18,19,59] |
Microcera diploa | CBS 735.79 = BBA 62173 = NRRL 13966 | HQ897899 | – | – | – | HQ897817 | – | – | HQ897763 | – | – | [18] |
Microcera kuwanaspidis | SICAUCC 21-0006 T | MW462125 | MW462126 | MW462127 | MW462128 | MW484993 | MW462905 | MW462129 | MW462124 | MW462117 | MW462130 | This study |
Microcera kuwanaspidis | SICAUCC 21-0009 | MZ044037 | MZ044038 | MZ044039 | MZ044040 | MZ029437 | MZ029436 | MZ044041 | MZ044036 | MZ044035 | MZ044042 | This study |
Microcera larvarum | CBS 169.30 | HQ897855 | – | – | EU860049 | EU860064 | EU860064 | – | HQ897717 | – | EU860025 | [18,60] |
Microcera larvarum | CBS 738.79 = BBA 62239 = MUCL 19033 = NRRL 20473 | KM231060 | KM231230 | KM231408 | KM231559 | KM231825 | KM231701 | KM232252 | KM232387 | KM231957 | EU860026 | [19,60] |
Microcera larvarum | A.R. 4580 = CBS 133964 | – | – | – | – | KC291751 | KC291759 | KC291894 | – | KC291832 | KC291935 | [61] |
Microcera rubra | CBS 638.76 T = BBA 62460 = NRRL 20475 | HQ897903 | KM231231 | KM231409 | EU860050 | HQ897820 | KM231702 | KM232253 | HQ897767 | JF740696 | EU860018 | [18,19,60] |
Pseudocosmospora rogersonii | CBS 133981 T = G.J.S. 90-56 | – | – | – | – | KC291729 | KC291780 | KC291878 | – | KC291852 | KC291915 | [61] |
Pseudocosmospora eutypellae | CBS 133966 T = A.R. 4562 | – | – | – | – | KC291721 | KC291757 | KC291871 | – | KC291830 | KC291912 | [61] |
Pseudocosmospora eutypae | C.H. 11-01 = CBS 133961 T | – | – | – | – | KC291735 | KC291766 | KC291884 | – | KC291837 | KC291925 | [61] |
Tilachlidium brachiatum | CBS 505.67 | KM231076 | KM231249 | KM231436 | – | KM231839 | KM231720 | KM232272 | KM232415 | KM231976 | KM232110 | [19] |
Tilachlidium brachiatum | CBS 363.97 | KM231077 | KM231248 | KM231435 | KM231583 | KM231838 | KM231719 | KM232271 | KM232414 | KM231975 | KM232109 | [19] |
Notes: superscript T represents ex-type or ex-epitype isolates. “–” means that the sequence is missing or unavailable. New sequences are listed in bold. Abbreviations. A.R.: Amy Y. Rossman, USDA-ARS, MD, USA; ATCC: American Type Culture Collection, U.S.A.; BBA: Julius Kühn-Institute, Institute for Epidemiology and Pathogen Diagnostics, Berlin and Braunschweig, Germany; CBS: Centraalbureau voor Schimmelcultures, Utrecht, Netherlands; C.H.: Cesar S. Herrera, University of Maryland, MD, USA; G.J.S.: Gary J. Samuels, USDA-ARS, MD, USA; IMI: International Mycological Institute, CABI-Bioscience, Egham, UK; MAFF: MAFF Genebank, National Institute of Agrobiological Sciences, Ibaraki, Japan; MUCL: Mycothèque de I’Université Catholique de Louvain, Belgium; NRRL: Agricultural Research Service Culture Collection, USA; TG: T. Gräfenhan collection.