Table 2.

New isolate sequences of strawberry-infecting viruses and their closest homolog in GenBank.

Virus	Isolate	ID	Top Hit ID	%ID	% Cov	Virus	Isolate	ID	Top Hit ID	%ID	% Cov
ApMV	H2401	MZ320192	KY965059.1	92	100	SMoV	H2389	MZ326670	KU200461.1	83	99
	H2403	MZ320193	KY965059.1	92	99		H2396	MZ326671	MH746440.1	97	99
	H2413	MZ320194	KY965059.1	92	100		H2404	MZ326672	LC550286.1	94	99
BPYV	H2416	MZ320195	AY330918.2	83	98		H2405	MZ326673	LC550287.1	96	100
	H2433	MZ320196	AY330918.2	100	100	SMYEV	H2423	MZ326674	D12517.1	99	100
	H2391	MZ320197	AY330918.2	100	100		H2424	MZ326675	KR559736.1	80	100
	H2396	MZ320198	AY330918.2	99	100		H2425	MZ326676	LC515236.1	82	99
	H2401	MZ320199	AY330918.2	99	100		H2429	MZ326677	KR559736.1	79	99
	H2402	MZ320200	AY330918.2	99	100		H2432	MZ326678	KR350470.1	89	100
	H2403	MZ320201	AY330918.2	99	100		H2435	MZ326679	KX150372.1	82	100
	H2405	MZ320202	AY330918.2	100	100		H2470	MZ326680	KR559736.1	79	99
	H2407	MZ320203	AY330918.2	100	100		H2394	MZ326681	KR559736.1	80	100
	H2408	MZ320204	AY330918.2	99	100		H2398	MZ326682	LC515236.1	97	100
	H2409	MZ320205	AY330918.2	99	100		H2400	MZ326683	D12517.1	91	100
	H2413	MZ320206	AY330918.2	100	100		H2402	MZ326684	KR559736.1	80	100
	H2415	MZ320207	AY330918.2	100	100		H2406	MZ326685	KR350470.1	88	100
	H2419	MZ320208	AY330918.2	100	100		H2408	MZ326686	AJ577359.1	98	100
FCCV	H2425	MZ320209	DQ093961.2	100	100		H2422	MZ326687	KR350470.1	85	100
	H2427	MZ320210	DQ093961.2	100	100	SPaV	H2435	MZ351164	AY488138.2	100	99
	H2428	MZ320211	DQ093961.2	99	99		H2391	MZ351165	MN747001.1	86	63
FCILV	H2425	MZ320212	AY682102.1	100	100		H2407	MZ351166	AY488137.2	79	71
	H2426	MZ320213	AY682102.1	100	99		H2419	MZ351167	MN747001.1	88	99
	H2427	MZ320214	AY682102.1	95	100		H2420	MZ351168	MN747001.1	90	97
	H2428	MZ320215	AY682102.1	95	100	SPV-1	H2429	MZ351169	KM233706.1	97	100
SCFaV	H2399	MZ320216	DQ860839.1	100	100		H2470	MZ351170	MK142237.1	98	99
SCrV-3	H2432	MZ326662	EU267168.1	100	91		H2400	MZ351171	KM233706.1	97	100
	H2435	MZ326663	EU267168.1	100	92		H2404	MZ351172	KM233705.1	99	100
	H2406	MZ326664	EU267168.1	96	91		H2409	MZ351173	KM233705.1	98	100
SCrV-4	H2432	MZ326665	KY488557.1	83	77	SVBV	H2431	MZ351174	X97304.1	100	100
	H2406	MZ326666	KY488557.1	83	76		H2393	MZ351175	X97304.1	100	100
	H2420	MZ326667	KY488557.1	98	71		H2421	MZ351176	KX950836.1	98	100
SCV	H2395	MZ326668	MH129615.1	94	100	ToRSV	H2392	MZ351177	KM083892.1	82	99
	H2399	MZ326669	MH129615.1	99	100

Strawberry mottle virus (SMoV), beet pseudo yellows virus (BPYV), strawberry pallidosis-associated virus (SPaV), tomato ringspot virus (ToRSV), strawberry mild yellow edge virus (SMYEV), strawberry vein banding virus (SVBV), strawberry crinkle virus (SCV), strawberry polerovirus 1 (SPV-1), apple mosaic virus (ApMV), strawberry chlorotic fleck virus (SCFaV), strawberry crinivirus 4 (SCrV-4), strawberry crinivirus 3 (SCrV-3), Fragaria chiloensis latent virus (FClLV) and Fragaria chiloensis cryptic virus (FCCV). Identity for GenBank accession number (ID), coverage (Cov). Blue shading, proportional to the value, highlights divergent isolates.