Table 3.
Proposed Species | Virus Name | Abbreviation 1 | Host Species | Isolates | Available Sequences | Ref. | ||
---|---|---|---|---|---|---|---|---|
GenBank | Region | Length [b] | ||||||
Pestivirus L | Linda virus | LindaV | Sus scrofa | Austria1 | NC035432 | genome | 12,614 | [40] |
Pestivirus M | Phocoena pestivirus |
PhoPeV | Phocoena phocoena | PhoPeV-1 | MK910227 | genome | 11,880 | [22] |
PhoPeV-2 | MK910228 | genome | 11,880 | [22] | ||||
PhoPeV-3 | MK910229 | genome | 12,060 | [22] | ||||
Pestivirus N | Tunisian sheep-like pestivirus | TSV | Capra aegagrus hircus | 70292/2007/EN | MZ664273 | cds | 12,268 | [39] |
Ovis gmelini aries | 92019/2007/AG | MZ664274 | genome | 12,286 | [39] | |||
Pestivirus O | ovine/IT pestivirus |
ovIT PeV | Ovis gmelini aries | 338710-2/2017 | MK618725 | partial | 11,143 | [41] |
338710-3/2017 | MK618726 | cds | 12,173 | [41] | ||||
1756/2017 | MG770617 | cds | 12,173 | [41] | ||||
Pestivirus P | pangolin pestivirus |
DYPV | Amblyomma javanense | DYAJ1 | MK636874 | genome | 12,443 | [21] |
Manis javanica | DYCS | MK636875 | genome | 12,446 | [21] | |||
Pestivirus Q | rodent pestivirus | RtNn-PeV | Niviventer niviventer | HuB2014 | KY370101 | cds | 13,220 | [24] |
Pestivirus R | rodent pestivirus | RtAp-PeV | Apodemus peninsulae | JL2014 | KY370100 | cds | 12,768 | [24] |
n.a. | rodent pestivirus | RtNe-PeV | Niviventer excelsior | SC2014 | KY370099 | partial | 11,644 | [24] |
n.a. | rodent pestivirus | RtAd-PeV | Apodemus draco | SAX2015 | KY370102 | partial | 11,551 | [24] |
n.a. | rodent pestivirus | RtNn-PeV | Niviventer niviventer | SAX2015 | KY370103 | partial | 11,435 | [24] |
Pestivirus S | bat pestivirus | BtSk-PeV | Scotophilus kuhlii | 1/GX2017 | MH282908 | cds | 11,921 | [23] |
n.a. | bat pestivirus | 3/GX2017 | MH282910 | partial | 7266 | [23] | ||
n.a. | bat pestivirus | 4/GX2017 | MH282911 | partial | 7132 | [23] |
n.a., not assigned (no complete cds available); 1 Virus names and virus abbreviations are not official ICTV designations. Given is the first proposed or commonly used abbreviation.