Table 1. Summary of Illumina transcriptome sequencing data for Pogostemon cablin included in this study.
| Sample | Raw_reads | Raw_bases | Clean_reads | Clean_bases | Valid_bases (%) | Q30 (%) | GC (%) |
|---|---|---|---|---|---|---|---|
| NX1 | 41696522 | 6.11G | 40710992 | 5.67G | 92.75 | 93.25 | 44.81 |
| NX2 | 42933824 | 6.29G | 41888242 | 5.85G | 92.94 | 93.40 | 44.82 |
| NX3 | 54211520 | 7.94G | 53282330 | 7.49G | 94.34 | 93.91 | 44.95 |
| PX1 | 44159282 | 6.47G | 43142174 | 6.09G | 94.08 | 92.85 | 45.47 |
| PX2 | 44553200 | 6.53G | 43540052 | 6.17G | 94.47 | 92.96 | 45.48 |
| PX3 | 40643222 | 5.95G | 39681932 | 5.56G | 93.32 | 92.73 | 45.01 |
| Total | 268197570 | 39.29G | 262245722 | 36.83G | |||
| Mean | 44699595 | 6.55G | 43707620 | 6.14G | 93.65 | 93.18 | 45.09 |
Note:
Q30 represents the percentage of the number of bases with Phred scores > 30 in the raw bases to the total number of bases.