Table 1.
Primer name | Primer sequence (5´ → 3´) | Amplicon size (bp) | Annealing temperature (ºC) | Refs. |
---|---|---|---|---|
iucA |
F: AATCAATGGCTATTCCCGCTG R: CGCTTCACTTCTTTCACTGACAGG |
239 | 62 | [18] |
peg-344 |
F: GCGGGAAAGGACAGAAAGCCAGTG R: GAGGGAAGATGAGAAATACGAGC |
332 | 56 | This study |
iutA |
F: GCCGCTAGGTTGGTGATGT R: CTCTGGTCGTGCTGGTTGA |
949 | 61 | This study |
iroB |
F: GTGTTGGATTCCGCCAGTGA R: TTCCGCCGCTACCTCTTCA |
366 | 61 | This study |
magA |
F: GGTGCTCTTTACATCATTGC R: GCAATGGCCATTTGCGTTAG |
1282 | 51 | [47] |
rmpA |
F: GAGTATTGGTTGACAGCAGGAT R: AGCCGTGGATAATGGTTTACAA |
250 | 53 | This study |
kfu |
F: ATAGTAGGCGAGCACCGAGA R: AGAACCTTCCTCGCTGAACA |
520 | 60 | [48] |
allS |
F: CCGAAACATTACGCACCTTT R: ATCACGAAGAGCCAGGTCAC |
508 | 60 | [48] |
ybt |
F: GACGGAAACAGCACGGTAAA R: GAGCATAATAAGGCGAAAGA |
242 | 60 | [47] |
blaCTX-M-15 |
F: CGCTTTGCGATGTGCAG R: ACCGCGATATCGTTGGT |
590 | 53 | This study |
blaTEM |
F: GAGTATTCAACATTTCCGTGTC R: TAATCAGTGAGGCACCTATCTC |
800 | 54 | [49] |
blaSHV |
F: AAGATCCACTATCGCCAGCAG R: ATTCAGTTCCGTTTCCCAGCGG |
200 | 60 | [49] |
blaOXA-48 |
F-GCGTGGTTAAGGATGAACAC R-CATCAAGTTCAACCCAACCG |
745 | 60 | [49] |
blaKPC-1 |
F: CGTCTAGTTCTGCTGTCTTG R:CTTGTCATCCTTGTTAGGCG |
798 | 55 | [50] |
blaNDM-1 |
F: GGTTTGGCGATCTGGTTTTC R: CGGAATGGCTCATCACGATC |
621 | 54 | [50] |
ompk36 group A |
F: GAAGGCGCTCTGTCTCCTA R: TGCCATCATAGATGTCATAGG |
97 | 60 | [13] |
ompk36 group B |
F: CGGTCGTGGCGCGCAGAAA R: GGTTGTTCTGA TCGTCGGTA |
125 | 64 | [13] |
ompk36 group C |
F: CAACAACGGTCGT GGTTGGA R: CCCAGTGCCGGAACACTATT |
144 | 62 | [13] |
ompk36 group D |
F: GAAGGTACTTCTCCGACCAA R: AATCAGATTCTCCGTTGCCG |
283 | 62 | [13] |