TABLE 1.

Comparison of Verticillium longisporum and Verticillium dahliae genome assemblies

Parameter	Value for assembly
	V. longisporum VLB2a	V. longisporum VL20a	V. longisporum PD589	V. dahliae JR2b
Genome size (Mb)	72.7	72.2	72.0	36.2
Assigned to A1 subgenome	36.2	36.5	36.0
Assigned to D subgenome	35.9	35.1	34.7
Undetermined	0.6	0.6	1.3
No. of chromosomes	15	15	16/17d	8
No. of predicted genes	18,679	18,592	18,251	9,636
Assigned to A1 subgenome	9,342	9,343	8,961
Assigned to D subgenome	9,298	9,188	9,229
Undetermined	39	61	61
No. of predicted genes encoding secreted proteins	2,084	2,049	1,960	1,071
Assigned to A1 subgenome	1,052	1,041	952
Assigned to D subgenome	1,025	1,004	1,000
Undetermined	7	4	8
Repeat content (%)	14.55	14.54	12.78	11.69
BUSCO completeness (%)c	99.1	99.3	97.9	98.6

^aPreviously published assemblies were reassembled using Hi-C sequencing (40).

^bSee reference 47.

^cBased on Ascomycota benchmarking universal single-copy orthologs (BUSCOs).

^dThe total chromosome number is uncertain as PD589 contains one (partially) duplicated chromosome.