Table 4.
Performance of existing tools for phosphorylation site prediction with 5-fold cross-validation
| Residue type | Method |
 (%) |
 (%) |
 (%) |
|
|
|---|---|---|---|---|---|---|
| S/T | DeepIPs | 80.63 | 79.61 | 83.50 | 0.6316 | 0.8937 |
| DeepPSP | 80.21 | 76.65 | 83.78 | 0.6058 | 0.8762 | |
| MusiteDeep2020 | 80.95 | 82.95 | 78.96 | 0.6196 | 0.8867 | |
| MusiteDeep2017 | 80.17 | 78.87 | 81.46 | 0.6035 | 0.8798 | |
| Y | DeepIPs | 83.33 | 90.48 | 80.95 | 0.7175 | 0.9252 |
| DeepPSP | 76.19 | 95.24 | 57.14 | 0.5665 | 0.8209 | |
| MusiteDeep2020 | 85.71 | 95.24 | 76.19 | 0.7276 | 0.8730 | |
| MusiteDeep2017 | 80.95 | 85.71 | 76.19 | 0.6219 | 0.8141 |