TABLE 1.
General information on the 17 microbial genomes used for the metagenomics and metatranscriptomic analyses and pathway reconstructions of the ganjang microbiota
| Genome name | Sourcea | Genome size (Mb) | G+C content (%) | GenBank accession no. | No. of 16S rRNA or ITS genes (related genome GenBank accession no.)b |
|---|---|---|---|---|---|
| Bacillus sp. KG1 | M | 3.1 | 46.7 | JABXGZ000000000 | 10 (CP011939) |
| Bacillus sp. KG2 | M | 3.1 | 37.6 | JABXHA000000000 | 8 (CP023704) |
| Bacillus sp. KG3 | M | 4.5 | 45.5 | JABXHB000000000 | 9 (CP021920) |
| Corynebacterium sp. KG4 | M | 3.0 | 68.9 | JABXHC000000000 | 5 (CP009251) |
| Staphylococcus sp. KG5 | M | 3.1 | 32.9 | JABXHD000000000 | 6 (CP017466) |
| Halomonas sp. KG6 | M | 3.0 | 64.7 | JABXHE000000000 | 4 (CP019326) |
| Virgibacillus sp. KG7 | M | 3.6 | 36.5 | JABXHF000000000 | 8 (CP017962) |
| Alteromonadaceae sp. KG8 | M | 4.9 | 54.5 | JABXHG000000000 | 3 (CP011929) |
| Idiomarinaceae sp. KG9 | M | 4.2 | 46.5 | JABXHH000000000 | 4 (CP027188) |
| Micrococcaceae sp. KG10 | M | 3.1 | 56.5 | JABXHI000000000 | 6 (NC_018531) |
| Tetragenococcus sp. KG11 | I | 2.4 | 36.0 | JABEVO000000000 | 5 (CP012047) |
| Tetragenococcus sp. KG12 | I | 2.5 | 35.7 | JABTEK000000000 | 5 (CP012047) |
| Chromohalobacter sp. KG13 | I | 3.5 | 61.0 | JABEVP000000000 | 5 (NC_007963) |
| Marinobacter sp. KG14 | I | 3.5 | 55.0 | JABEVQ000000000 | 3 (NC_017067) |
| Aspergillus sp. KG15 | I | 38.0 | 47.8 | JABULI000000000 | 3 (NC_036441) |
| Wickerhamomyces sp. KG16 | 1 | 23.9 | 34.5 | JAHTLX000000000, JAHTLY000000000 | 1 |
| Debaryomyces sp. C11 | 1 | 24.5 | 36.4 | JADOBC000000000, JADOBD000000000 | 5 |
a
M, metagenome-assembled genome; I, isolate-derived genome.
b
Where the exact numbers of the 16S rRNA and ITS genes could not be obtained from the genomes, they were estimated from the most closely related complete genome sequences available in GenBank (shown in parenthesis).