FIG 2.
Profile of presence or absence of metabolic or biosynthetic capacities in DPANN archaea and Euryarchaeota (outgroup) based on annotation done with eggNOG-mapper v. 2.0 (default parameters: E value < 10−3, bit score > 60). The phylogenomic tree shown in the left was constructed based on whole-genome sequences with CVTree3 (k-mer = 4; Euryarchaeota was used as outgroup), and the phylogenetic groups were colored according to the original taxonomic assignment in the genome database. The types of habitats from which each genome was recovered are shown in the first bar (on the left) by different colors. The solid and open cells represent the presence and absence of the enzymes, respectively. The cells involved in different pathways are distinguished with different colors. Detailed description for abbreviations is provided in Data S1 at https://doi.org/10.6084/m9.figshare.14806173.v1.