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. 2021 Aug 11;11(9):2441–2452. doi: 10.1002/2211-5463.13261

Table 1.

List of publicly available NGS datasets and extracted total number of variants using JWES. Table 1 provides an overview of different whole genome/exome sequencing projects selected for variant discovery using JWES. Table 1 includes data type, project ids, sample numbers and ids, total variant count, sources URL, and date last accessed.

Data Type Project IDs Sample numbers Sample IDs Total variants Source URL Date accessed
WGS PRJNA657985 1 SRR12474733 43 685 https://www.ebi.ac.uk/ena/browser/view/PRJEB39632 06‐28‐2021
WGS PRJNA657938 1 SRR12486921 2 736 453 https://www.ebi.ac.uk/ena/browser/view/PRJNA657985 06‐28‐2021
WGS PRJNA624223 1 SRR12328890 1 793 959 https://www.ebi.ac.uk/ena/browser/view/PRJNA657938 06‐28‐2021
WGS PRJEB39632 3 ERR4387385, ERR4387386, ERR4387388 154 016 https://www.ebi.ac.uk/ena/browser/view/PRJNA649101 06‐28‐2021
WGS PRJNA649101 7 SRR12336742, SRR12336753, SRR12336755, SRR12336756, SRR12336761, SRR12336765, SRR12336766 54 930 https://www.ebi.ac.uk/ena/browser/view/PRJNA624223 06‐28‐2021
WGS/ATAC‐seq PRJNA207663 1 SRR891275 20 749 https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR891275 02‐28‐2021