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. 2017 Jun 20;7(12):e2334. doi: 10.21769/BioProtoc.2334

Table 1. Primers.

HIV Primers used in this protocol HXB2 bp
Name Sequence 5'-3' bp Start End
BEF1 TAATAGCAATAGTTGTGTGG 20 6,111 6,130
BEF2 CAATAGTTGTGTGGTCCATAG 21 6,117 6,137
BER2 CAACAGATGCTGTTGCGC 18 7,905 7,922
BNF1 CTGGCTGTGGAAAGATACCT 19 7,965 7,984
BNR1 AGCTCCCAGGCTCAGATCT 19 9,558 9,576
BNR2 ATCTGAGGGCTCGCCACT 18 9,488 95,05
Alternate Primers from Lamers et al., 2016 Sarcoma HXB2 bp
Name Sequence 5'-3' bp Start End
EF2 ACAGTCTATTATGGGGTRCC 20 6,333 6,352
EF3 CATAATGTTTGGGCCACACA 20 6,420 6,439
ER1 ATTCACTTCTCCAATTRTC 19 7,653 7,671
NF1 TTAGGCAGGGATAYTCACC 19 8,347 8,365
NR1 AGCTCCCAGGCTCAGATCT 19 9,558 9,576
NR2 ATCTGAGGGCTCGCCACT 18 9,488 9,505