Table 3.
conjugate | KI | target | dye | binding and kinase inhibition (cell-free, nM, unless otherwise noted) | potencies relative to parent KI | cell membrane permeable | applied in vivo |
---|---|---|---|---|---|---|---|
1 23 | dasatinib | Src, Abl | BODIPY | Kd: Src 0.5; Abl 0.15 | N/A | yes | no |
2 23 | dasatinib (DFG-out) | Kd: Src 2.8; Abl 0.75 | ligand induced different binding conformation | N/A | N/A | ||
3 23 | dasatinib (αC-helix-out) | Kd: Src 4.6; Abl 0.58. | N/A | N/A | |||
4 26 | a type II KI | Src, p38 | IC50:Src 25.4; p38 25.5 | N/A | N/A | N/A | |
5 30–32 | HS-133 | PI3Kα | intrinsically fluorescent | IC50: 68 nM | N/A | yes | yes |
6 33 | gefitinib | ERBB2 | Ki (in cell): 3,100 | N/A | yes | no | |
7a-b 34 | Ki (in cell): 7a N/A, 7b 9 μM | reporter of type I or II binding mode | yes | no | |||
8a 37 , 8c 38 | Ki (in cell): 8a 71; 8c N/A | yes | no | ||||
8b 37 | lapatinib | Ki (in cell): 27 | yes | no | |||
9b 39 | type I KI | Aurora-A, Blk, LCK | intrinsically fluorescent | IC50:222 nM (Arora-A), 554 nM (Blk), 124 nM (LCK) | N/A | yes | no |
10a43, 10b44 | ibrutinib | Btk | BODIPY | IC50: 10a N/A: 10b ~200 | 100x inferior | yes | yes |
11 13 | BI2536 | PLK1–3 | IC50: PLK1 5.01; PLK2 19.4; PLK3 9.37 | comparable | yes | no | |
12 49 | nilotinib | BCR-Abl | N/A | inferior | yes | no | |
13a 7 | ibrutinib | Btk | SiRh | IC50: 122 | 200~300x inferior | yes | yes |
13b 7 | spebrutinib | Btk | SiRh | IC50: 283 | yes | no | |
14 19 | vemurafenib | BRAFV600E | BODIPY | EC50: 380 | 3x inferior | yes | yes |
15 11 | UNC2025 | MERTK | SiRh | IC50 (in cell): 19.7 μM | inferior | yes | yes |
16 54 | gefitinib | EGFR | aza-BODIPY | IC50 (in cell): PC9, 50 H1650, 780 |
superior | yes | yes |
17 61,79 | dasatinib | Src, Lyn | NIR Cy7 (MHI-148) | IC50 (Src, cell-free): 184 IC50 (in cell): 5380 |
less potent in cell-free than in cell-based assays | yes | yes |
18 8 | crizotinib | ALK | NIR Cy7 (IR-786) | EC50: (average of 3 GBM cell lines): 50 ± 20 | 100x superior | yes | no |
19 20 | afatinib | EGFR, HER2 | Cy3 and Cy5 | IC50 (three cell lines average): Cy3-AFTN 1480 Cy5-AFTN 2460 |
inferior | yes | yes |
20 83 | dasatinib | Src | Cy5 | IC50 (in cell): 46 ± 30 nM | similar but inferior (used for PET) | yes | yes |
21, 22 9 | erlotinib | EGFR | porphyrin | N/A | used as PDT photosensitizer | yes | yes |