Table 1.
Peptides used in this study. Amino acid sequences, molecular weights, net charges, length, MICs (against M. luteus) and Ki values (against bovine trypsin) of the tested peptides.
SN | Name | Sequence | Charge | Length | MIC (µg/mL) M. luteus | Ki (M) | MW in Daltons | |
---|---|---|---|---|---|---|---|---|
1 | SFTI-cyclic | GRCTKSIPPICFPD | +2 | 14 | – | 5.5 ± 0.18 × 10−8 | 1513.6 | |
Box A | 2 | HVBBI | SVIGCWTKSIPPRPCFVK | +3 | 18 | 150 | 3.7 ± 0.11 × 10−7 | 2016.6 |
3 | SFTI-loop | CTKSIPPICF | +1 | 10 | – | 0.5 ± 0.19 × 10−6 | 1108.3 | |
4 | HVBBI-loop | CWTKSIPPRPCF | +2 | 12 | >150 | 1.4 ± 0.23 × 10−6 | 1434.6 | |
5* | HSEP1 | SVIGCTKSIPPICFVK | +2 | 16 | 75 | 2.3 ± 0.14 × 10−7 | 1690.2 | |
Box B | 6* | HSEP2 | SVIFGCTKSIPPICFVGFK | +2 | 19 | 6.25 | 5.8 ± 0.32 × 10−7 | 2041.5 |
7* | HSEP3 | RSVIFGCTKSIPPICFVGFK | +3 | 20 | 1.25 | 2 ± 0.47 × 10−7 | 2197.6 | |
8* | FITC-HSEP2 | FITC-SVIFGCTKSIPPICFVGFK | +2 | 19 | 6.25 | – | 2543.8 | |
9* | HSEP2-∆K8 | SVIFGCTISIPPICFVGFK | +1 | 18 | >150 | NI | 1912.6 | |
Box C | 10* | HSEP2-K8G | SVIFGCTGSIPPICFVGFK | +1 | 19 | 37.5 | NI | 1969.7 |
11* | HSEP2-∆K19 | SVIFGCTKSIPPICFVGFI | +1 | 18 | 25 | 4.4 ± 0.12 × 10−7 | 1913.3 | |
12* | HSEP2-ΔHR | AICTKSIPPICGIK | +2 | 12 | >150 | 1 ± 0.09 × 10−6 | 1215.5 | |
13* | HSEP2-ΔHR- ΔK8 | AICTISIPPICGIK | +1 | 11 | >150 | NI | 1087.3 | |
14* | HSEP3-∆TL,CL+ | RSVIFGCYRRFCFVGFK | +4 | 17 | 3.125 | NI | 2083.40 | |
15* | HSEP3a | RSFIFGCTKSIPPICFVGFK | +3 | 20 | 12.5 | 5.5 ± 0.13 × 10−8 | 2245.50 | |
Box D | 16* | HSEP3b | RSVIFGCTKSIPPICFVGTR | +3 | 20 | 6.25 | 0.5 ± 0.38 × 10−6 | 2179.35 |
17* | HSEP3c | RSVIFGCTKSKIPPICFVGFK | +4 | 21 | 3.125 | 1.4 ± 0.25 × 10−6 | 2398.35 | |
18* | HSEP3d | RSWIFCTRYIPPICFVGWR | +3 | 19 | 3.125 | 3.7 ± 0.16 × 10−7 | 2325.40 |
Underlined residues are the ones that are mutated with respect to the mother peptide.
*Peptides engineered for this study. NI, No Inhibition.
IImplies residues deleted from the mother peptide (e.g., those with ΔK).